Protein–RNA interactions for Protein: Q8R4P5

Tmc1, Transmembrane channel-like protein 1, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmc1Q8R4P5 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Tmc1Q8R4P5 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC22.43■■□□□ 1.18
Tmc1Q8R4P5 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Tmc1Q8R4P5 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Tmc1Q8R4P5 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Tmc1Q8R4P5 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Tmc1Q8R4P5 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Tmc1Q8R4P5 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Tmc1Q8R4P5 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Tmc1Q8R4P5 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Tmc1Q8R4P5 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Tmc1Q8R4P5 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Tmc1Q8R4P5 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
Tmc1Q8R4P5 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC22.42■■□□□ 1.18
Tmc1Q8R4P5 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
Tmc1Q8R4P5 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Tmc1Q8R4P5 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Tmc1Q8R4P5 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Tmc1Q8R4P5 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Tmc1Q8R4P5 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Tmc1Q8R4P5 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Tmc1Q8R4P5 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Tmc1Q8R4P5 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Tmc1Q8R4P5 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Tmc1Q8R4P5 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Tmc1Q8R4P5 Gm37805-201ENSMUST00000192612 1094 ntBASIC22.4■■□□□ 1.18
Tmc1Q8R4P5 AC099934.2-201ENSMUST00000196389 70 ntBASIC22.4■■□□□ 1.18
Tmc1Q8R4P5 AC156953.1-201ENSMUST00000196953 70 ntBASIC22.4■■□□□ 1.18
Tmc1Q8R4P5 Gm7291-201ENSMUST00000199147 382 ntBASIC22.4■■□□□ 1.18
Tmc1Q8R4P5 AC157822.2-201ENSMUST00000200291 70 ntBASIC22.4■■□□□ 1.18
Tmc1Q8R4P5 Gm42642-201ENSMUST00000200683 355 ntBASIC22.4■■□□□ 1.18
Tmc1Q8R4P5 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Tmc1Q8R4P5 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC22.4■■□□□ 1.18
Tmc1Q8R4P5 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Tmc1Q8R4P5 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC22.4■■□□□ 1.18
Tmc1Q8R4P5 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Tmc1Q8R4P5 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
Tmc1Q8R4P5 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
Tmc1Q8R4P5 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Tmc1Q8R4P5 Gm10129-202ENSMUST00000193100 1316 ntBASIC22.39■■□□□ 1.18
Tmc1Q8R4P5 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Tmc1Q8R4P5 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Tmc1Q8R4P5 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Tmc1Q8R4P5 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Tmc1Q8R4P5 Gm27032-201ENSMUST00000183124 1116 ntBASIC22.39■■□□□ 1.17
Tmc1Q8R4P5 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Tmc1Q8R4P5 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Tmc1Q8R4P5 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Tmc1Q8R4P5 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Tmc1Q8R4P5 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Tmc1Q8R4P5 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.17
Tmc1Q8R4P5 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Tmc1Q8R4P5 AC165080.2-201ENSMUST00000217491 1530 ntBASIC22.38■■□□□ 1.17
Tmc1Q8R4P5 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Tmc1Q8R4P5 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Tmc1Q8R4P5 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC22.38■■□□□ 1.17
Tmc1Q8R4P5 Gm26571-201ENSMUST00000181399 666 ntBASIC22.38■■□□□ 1.17
Tmc1Q8R4P5 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC22.38■■□□□ 1.17
Tmc1Q8R4P5 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC22.38■■□□□ 1.17
Tmc1Q8R4P5 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Tmc1Q8R4P5 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Tmc1Q8R4P5 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Tmc1Q8R4P5 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
Tmc1Q8R4P5 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Tmc1Q8R4P5 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC22.37■■□□□ 1.17
Tmc1Q8R4P5 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Tmc1Q8R4P5 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Tmc1Q8R4P5 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Tmc1Q8R4P5 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Tmc1Q8R4P5 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC22.36■■□□□ 1.17
Tmc1Q8R4P5 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Tmc1Q8R4P5 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Tmc1Q8R4P5 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Tmc1Q8R4P5 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
Tmc1Q8R4P5 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Tmc1Q8R4P5 Gm29257-201ENSMUST00000186115 639 ntBASIC22.36■■□□□ 1.17
Tmc1Q8R4P5 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC22.36■■□□□ 1.17
Tmc1Q8R4P5 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Tmc1Q8R4P5 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Tmc1Q8R4P5 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Tmc1Q8R4P5 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Tmc1Q8R4P5 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Tmc1Q8R4P5 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Tmc1Q8R4P5 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
Tmc1Q8R4P5 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Tmc1Q8R4P5 Gm42569-201ENSMUST00000200539 472 ntBASIC22.35■■□□□ 1.17
Tmc1Q8R4P5 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Tmc1Q8R4P5 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Tmc1Q8R4P5 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Tmc1Q8R4P5 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Tmc1Q8R4P5 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Tmc1Q8R4P5 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Tmc1Q8R4P5 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Tmc1Q8R4P5 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Tmc1Q8R4P5 Gm27405-201ENSMUST00000184201 112 ntBASIC22.34■■□□□ 1.17
Tmc1Q8R4P5 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Tmc1Q8R4P5 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Tmc1Q8R4P5 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Tmc1Q8R4P5 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Tmc1Q8R4P5 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms