Protein–RNA interactions for Protein: Q8R3A2

Cdpf1, Cysteine-rich DPF motif domain-containing protein 1, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdpf1Q8R3A2 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdpf1Q8R3A2 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cdpf1Q8R3A2 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC15.21■□□□□ 0.03
Cdpf1Q8R3A2 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cdpf1Q8R3A2 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cdpf1Q8R3A2 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Cdpf1Q8R3A2 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdpf1Q8R3A2 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.2■□□□□ 0.02
Cdpf1Q8R3A2 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdpf1Q8R3A2 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.2■□□□□ 0.02
Cdpf1Q8R3A2 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdpf1Q8R3A2 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cdpf1Q8R3A2 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdpf1Q8R3A2 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdpf1Q8R3A2 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdpf1Q8R3A2 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC15.2■□□□□ 0.02
Cdpf1Q8R3A2 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdpf1Q8R3A2 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdpf1Q8R3A2 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdpf1Q8R3A2 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdpf1Q8R3A2 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.19■□□□□ 0.02
Cdpf1Q8R3A2 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdpf1Q8R3A2 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Cdpf1Q8R3A2 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdpf1Q8R3A2 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cdpf1Q8R3A2 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cdpf1Q8R3A2 Gm30025-201ENSMUST00000218555 728 ntBASIC15.19■□□□□ 0.02
Cdpf1Q8R3A2 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cdpf1Q8R3A2 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Cdpf1Q8R3A2 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdpf1Q8R3A2 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC15.19■□□□□ 0.02
Cdpf1Q8R3A2 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC15.19■□□□□ 0.02
Cdpf1Q8R3A2 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdpf1Q8R3A2 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.18■□□□□ 0.02
Cdpf1Q8R3A2 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdpf1Q8R3A2 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdpf1Q8R3A2 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Cdpf1Q8R3A2 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Cdpf1Q8R3A2 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.18■□□□□ 0.02
Cdpf1Q8R3A2 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC15.18■□□□□ 0.02
Cdpf1Q8R3A2 Gm7367-201ENSMUST00000057611 492 ntBASIC15.18■□□□□ 0.02
Cdpf1Q8R3A2 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Cdpf1Q8R3A2 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdpf1Q8R3A2 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Cdpf1Q8R3A2 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cdpf1Q8R3A2 Gm20100-201ENSMUST00000209418 2272 ntBASIC15.18■□□□□ 0.02
Cdpf1Q8R3A2 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdpf1Q8R3A2 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdpf1Q8R3A2 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdpf1Q8R3A2 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdpf1Q8R3A2 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdpf1Q8R3A2 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdpf1Q8R3A2 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdpf1Q8R3A2 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdpf1Q8R3A2 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdpf1Q8R3A2 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdpf1Q8R3A2 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.17■□□□□ 0.02
Cdpf1Q8R3A2 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdpf1Q8R3A2 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdpf1Q8R3A2 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.17■□□□□ 0.02
Cdpf1Q8R3A2 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.17■□□□□ 0.02
Cdpf1Q8R3A2 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC15.17■□□□□ 0.02
Cdpf1Q8R3A2 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdpf1Q8R3A2 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdpf1Q8R3A2 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC15.17■□□□□ 0.02
Cdpf1Q8R3A2 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.17■□□□□ 0.02
Cdpf1Q8R3A2 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Cdpf1Q8R3A2 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdpf1Q8R3A2 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdpf1Q8R3A2 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cdpf1Q8R3A2 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cdpf1Q8R3A2 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdpf1Q8R3A2 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdpf1Q8R3A2 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.16■□□□□ 0.02
Cdpf1Q8R3A2 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC15.16■□□□□ 0.02
Cdpf1Q8R3A2 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdpf1Q8R3A2 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdpf1Q8R3A2 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdpf1Q8R3A2 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdpf1Q8R3A2 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdpf1Q8R3A2 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cdpf1Q8R3A2 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdpf1Q8R3A2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdpf1Q8R3A2 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Cdpf1Q8R3A2 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cdpf1Q8R3A2 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdpf1Q8R3A2 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdpf1Q8R3A2 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cdpf1Q8R3A2 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdpf1Q8R3A2 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdpf1Q8R3A2 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cdpf1Q8R3A2 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cdpf1Q8R3A2 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Cdpf1Q8R3A2 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.15■□□□□ 0.02
Cdpf1Q8R3A2 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Cdpf1Q8R3A2 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdpf1Q8R3A2 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdpf1Q8R3A2 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdpf1Q8R3A2 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdpf1Q8R3A2 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms