Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Chmp7Q8R1T1 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Chmp7Q8R1T1 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
Chmp7Q8R1T1 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC23.51■■□□□ 1.35
Chmp7Q8R1T1 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC23.51■■□□□ 1.35
Chmp7Q8R1T1 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Chmp7Q8R1T1 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Chmp7Q8R1T1 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Chmp7Q8R1T1 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Chmp7Q8R1T1 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
Chmp7Q8R1T1 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
Chmp7Q8R1T1 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Chmp7Q8R1T1 Gm18688-201ENSMUST00000204695 1859 ntBASIC23.51■■□□□ 1.35
Chmp7Q8R1T1 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC23.51■■□□□ 1.35
Chmp7Q8R1T1 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Chmp7Q8R1T1 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Chmp7Q8R1T1 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Chmp7Q8R1T1 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Chmp7Q8R1T1 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Chmp7Q8R1T1 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Chmp7Q8R1T1 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Chmp7Q8R1T1 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Chmp7Q8R1T1 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Chmp7Q8R1T1 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
Chmp7Q8R1T1 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Chmp7Q8R1T1 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
Chmp7Q8R1T1 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Chmp7Q8R1T1 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Chmp7Q8R1T1 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Chmp7Q8R1T1 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Chmp7Q8R1T1 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Chmp7Q8R1T1 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Chmp7Q8R1T1 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
Chmp7Q8R1T1 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Chmp7Q8R1T1 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Chmp7Q8R1T1 Gm37805-201ENSMUST00000192612 1094 ntBASIC23.49■■□□□ 1.35
Chmp7Q8R1T1 Gm42545-201ENSMUST00000202755 922 ntBASIC23.49■■□□□ 1.35
Chmp7Q8R1T1 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Chmp7Q8R1T1 Gm9987-201ENSMUST00000069768 567 ntBASIC23.49■■□□□ 1.35
Chmp7Q8R1T1 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC23.49■■□□□ 1.35
Chmp7Q8R1T1 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Chmp7Q8R1T1 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Chmp7Q8R1T1 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Chmp7Q8R1T1 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Chmp7Q8R1T1 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Chmp7Q8R1T1 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
Chmp7Q8R1T1 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
Chmp7Q8R1T1 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Chmp7Q8R1T1 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Chmp7Q8R1T1 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC23.48■■□□□ 1.35
Chmp7Q8R1T1 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC23.48■■□□□ 1.35
Chmp7Q8R1T1 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Chmp7Q8R1T1 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Chmp7Q8R1T1 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Chmp7Q8R1T1 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Chmp7Q8R1T1 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Chmp7Q8R1T1 AC124581.1-201ENSMUST00000225416 1399 ntBASIC23.48■■□□□ 1.35
Chmp7Q8R1T1 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Chmp7Q8R1T1 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
Chmp7Q8R1T1 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC23.47■■□□□ 1.35
Chmp7Q8R1T1 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC23.47■■□□□ 1.35
Chmp7Q8R1T1 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
Chmp7Q8R1T1 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Chmp7Q8R1T1 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Chmp7Q8R1T1 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
Chmp7Q8R1T1 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Chmp7Q8R1T1 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
Chmp7Q8R1T1 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC23.46■■□□□ 1.35
Chmp7Q8R1T1 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC23.46■■□□□ 1.35
Chmp7Q8R1T1 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Chmp7Q8R1T1 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC23.46■■□□□ 1.35
Chmp7Q8R1T1 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Chmp7Q8R1T1 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Chmp7Q8R1T1 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Chmp7Q8R1T1 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
Chmp7Q8R1T1 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Chmp7Q8R1T1 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Chmp7Q8R1T1 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
Chmp7Q8R1T1 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Chmp7Q8R1T1 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Chmp7Q8R1T1 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Chmp7Q8R1T1 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
Chmp7Q8R1T1 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Chmp7Q8R1T1 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
Chmp7Q8R1T1 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Chmp7Q8R1T1 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC23.44■■□□□ 1.34
Chmp7Q8R1T1 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Chmp7Q8R1T1 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Chmp7Q8R1T1 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Chmp7Q8R1T1 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Chmp7Q8R1T1 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Chmp7Q8R1T1 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Chmp7Q8R1T1 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Chmp7Q8R1T1 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
Chmp7Q8R1T1 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC23.43■■□□□ 1.34
Chmp7Q8R1T1 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Chmp7Q8R1T1 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
Chmp7Q8R1T1 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
Chmp7Q8R1T1 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC23.43■■□□□ 1.34
Chmp7Q8R1T1 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms