Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.68■□□□□ 0.74
Rpp40Q8R1F9 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Rpp40Q8R1F9 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rpp40Q8R1F9 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rpp40Q8R1F9 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rpp40Q8R1F9 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rpp40Q8R1F9 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rpp40Q8R1F9 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rpp40Q8R1F9 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rpp40Q8R1F9 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rpp40Q8R1F9 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rpp40Q8R1F9 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.68■□□□□ 0.74
Rpp40Q8R1F9 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpp40Q8R1F9 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Rpp40Q8R1F9 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpp40Q8R1F9 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rpp40Q8R1F9 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rpp40Q8R1F9 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rpp40Q8R1F9 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpp40Q8R1F9 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpp40Q8R1F9 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rpp40Q8R1F9 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.67■□□□□ 0.74
Rpp40Q8R1F9 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpp40Q8R1F9 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpp40Q8R1F9 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpp40Q8R1F9 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpp40Q8R1F9 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rpp40Q8R1F9 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.66■□□□□ 0.74
Rpp40Q8R1F9 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rpp40Q8R1F9 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rpp40Q8R1F9 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
Rpp40Q8R1F9 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.66■□□□□ 0.74
Rpp40Q8R1F9 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Rpp40Q8R1F9 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.66■□□□□ 0.74
Rpp40Q8R1F9 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rpp40Q8R1F9 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.66■□□□□ 0.74
Rpp40Q8R1F9 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rpp40Q8R1F9 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpp40Q8R1F9 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpp40Q8R1F9 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpp40Q8R1F9 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpp40Q8R1F9 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpp40Q8R1F9 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpp40Q8R1F9 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Rpp40Q8R1F9 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.65■□□□□ 0.74
Rpp40Q8R1F9 Trmt13-210ENSMUST00000198454 880 ntBASIC19.65■□□□□ 0.74
Rpp40Q8R1F9 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.65■□□□□ 0.74
Rpp40Q8R1F9 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.65■□□□□ 0.74
Rpp40Q8R1F9 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpp40Q8R1F9 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpp40Q8R1F9 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.65■□□□□ 0.74
Rpp40Q8R1F9 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rpp40Q8R1F9 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpp40Q8R1F9 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpp40Q8R1F9 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rpp40Q8R1F9 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rpp40Q8R1F9 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rpp40Q8R1F9 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.64■□□□□ 0.73
Rpp40Q8R1F9 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.64■□□□□ 0.73
Rpp40Q8R1F9 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rpp40Q8R1F9 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rpp40Q8R1F9 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rpp40Q8R1F9 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rpp40Q8R1F9 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.63■□□□□ 0.73
Rpp40Q8R1F9 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Rpp40Q8R1F9 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rpp40Q8R1F9 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rpp40Q8R1F9 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.63■□□□□ 0.73
Rpp40Q8R1F9 Gm20760-201ENSMUST00000179197 648 ntBASIC19.63■□□□□ 0.73
Rpp40Q8R1F9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rpp40Q8R1F9 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rpp40Q8R1F9 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rpp40Q8R1F9 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rpp40Q8R1F9 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rpp40Q8R1F9 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpp40Q8R1F9 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.62■□□□□ 0.73
Rpp40Q8R1F9 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpp40Q8R1F9 Gm11249-201ENSMUST00000117071 859 ntBASIC19.62■□□□□ 0.73
Rpp40Q8R1F9 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Rpp40Q8R1F9 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.62■□□□□ 0.73
Rpp40Q8R1F9 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpp40Q8R1F9 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Rpp40Q8R1F9 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpp40Q8R1F9 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpp40Q8R1F9 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpp40Q8R1F9 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rpp40Q8R1F9 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpp40Q8R1F9 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpp40Q8R1F9 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Rpp40Q8R1F9 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.61■□□□□ 0.73
Rpp40Q8R1F9 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpp40Q8R1F9 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Rpp40Q8R1F9 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpp40Q8R1F9 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Rpp40Q8R1F9 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpp40Q8R1F9 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpp40Q8R1F9 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpp40Q8R1F9 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.61■□□□□ 0.73
Rpp40Q8R1F9 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpp40Q8R1F9 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms