Protein–RNA interactions for Protein: Q8K3Y3

Lin28a, Protein lin-28 homolog A, mousemouse

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28aQ8K3Y3 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lin28aQ8K3Y3 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lin28aQ8K3Y3 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lin28aQ8K3Y3 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Lin28aQ8K3Y3 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lin28aQ8K3Y3 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lin28aQ8K3Y3 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lin28aQ8K3Y3 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lin28aQ8K3Y3 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lin28aQ8K3Y3 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.12■□□□□ 0.33
Lin28aQ8K3Y3 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lin28aQ8K3Y3 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Lin28aQ8K3Y3 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lin28aQ8K3Y3 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lin28aQ8K3Y3 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lin28aQ8K3Y3 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lin28aQ8K3Y3 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lin28aQ8K3Y3 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lin28aQ8K3Y3 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Lin28aQ8K3Y3 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lin28aQ8K3Y3 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Lin28aQ8K3Y3 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.11■□□□□ 0.33
Lin28aQ8K3Y3 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lin28aQ8K3Y3 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Lin28aQ8K3Y3 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lin28aQ8K3Y3 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lin28aQ8K3Y3 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Lin28aQ8K3Y3 Trmt13-210ENSMUST00000198454 880 ntBASIC17.11■□□□□ 0.33
Lin28aQ8K3Y3 Gm44549-201ENSMUST00000208351 577 ntBASIC17.11■□□□□ 0.33
Lin28aQ8K3Y3 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lin28aQ8K3Y3 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lin28aQ8K3Y3 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lin28aQ8K3Y3 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lin28aQ8K3Y3 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lin28aQ8K3Y3 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lin28aQ8K3Y3 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lin28aQ8K3Y3 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lin28aQ8K3Y3 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.11■□□□□ 0.33
Lin28aQ8K3Y3 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lin28aQ8K3Y3 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lin28aQ8K3Y3 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Lin28aQ8K3Y3 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lin28aQ8K3Y3 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lin28aQ8K3Y3 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lin28aQ8K3Y3 Gm20760-201ENSMUST00000179197 648 ntBASIC17.1■□□□□ 0.33
Lin28aQ8K3Y3 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lin28aQ8K3Y3 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lin28aQ8K3Y3 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lin28aQ8K3Y3 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lin28aQ8K3Y3 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lin28aQ8K3Y3 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lin28aQ8K3Y3 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lin28aQ8K3Y3 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lin28aQ8K3Y3 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lin28aQ8K3Y3 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Lin28aQ8K3Y3 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lin28aQ8K3Y3 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lin28aQ8K3Y3 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lin28aQ8K3Y3 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lin28aQ8K3Y3 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Lin28aQ8K3Y3 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lin28aQ8K3Y3 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.09■□□□□ 0.33
Lin28aQ8K3Y3 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lin28aQ8K3Y3 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Lin28aQ8K3Y3 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lin28aQ8K3Y3 Gm2559-201ENSMUST00000201323 363 ntBASIC17.09■□□□□ 0.33
Lin28aQ8K3Y3 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lin28aQ8K3Y3 BC021767-201ENSMUST00000126387 1716 ntBASIC17.09■□□□□ 0.33
Lin28aQ8K3Y3 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lin28aQ8K3Y3 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lin28aQ8K3Y3 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lin28aQ8K3Y3 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lin28aQ8K3Y3 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
Lin28aQ8K3Y3 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lin28aQ8K3Y3 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lin28aQ8K3Y3 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Lin28aQ8K3Y3 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lin28aQ8K3Y3 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Lin28aQ8K3Y3 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Lin28aQ8K3Y3 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lin28aQ8K3Y3 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lin28aQ8K3Y3 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lin28aQ8K3Y3 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.08■□□□□ 0.32
Lin28aQ8K3Y3 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.08■□□□□ 0.32
Lin28aQ8K3Y3 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Lin28aQ8K3Y3 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lin28aQ8K3Y3 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Lin28aQ8K3Y3 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.07■□□□□ 0.32
Lin28aQ8K3Y3 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.07■□□□□ 0.32
Lin28aQ8K3Y3 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lin28aQ8K3Y3 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.07■□□□□ 0.32
Lin28aQ8K3Y3 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lin28aQ8K3Y3 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lin28aQ8K3Y3 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.07■□□□□ 0.32
Lin28aQ8K3Y3 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.07■□□□□ 0.32
Lin28aQ8K3Y3 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Lin28aQ8K3Y3 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lin28aQ8K3Y3 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.07■□□□□ 0.32
Lin28aQ8K3Y3 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Lin28aQ8K3Y3 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms