Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cchcr1Q8K2I2 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cchcr1Q8K2I2 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cchcr1Q8K2I2 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cchcr1Q8K2I2 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cchcr1Q8K2I2 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
Cchcr1Q8K2I2 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cchcr1Q8K2I2 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cchcr1Q8K2I2 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cchcr1Q8K2I2 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cchcr1Q8K2I2 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Cchcr1Q8K2I2 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cchcr1Q8K2I2 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cchcr1Q8K2I2 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cchcr1Q8K2I2 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cchcr1Q8K2I2 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cchcr1Q8K2I2 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cchcr1Q8K2I2 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cchcr1Q8K2I2 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Cchcr1Q8K2I2 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cchcr1Q8K2I2 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cchcr1Q8K2I2 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cchcr1Q8K2I2 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cchcr1Q8K2I2 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.67■■□□□ 1.06
Cchcr1Q8K2I2 Gm42778-201ENSMUST00000199644 553 ntBASIC21.67■■□□□ 1.06
Cchcr1Q8K2I2 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cchcr1Q8K2I2 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC21.67■■□□□ 1.06
Cchcr1Q8K2I2 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cchcr1Q8K2I2 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cchcr1Q8K2I2 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Cchcr1Q8K2I2 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cchcr1Q8K2I2 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cchcr1Q8K2I2 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC21.66■■□□□ 1.06
Cchcr1Q8K2I2 AC160393.1-201ENSMUST00000218378 1279 ntBASIC21.66■■□□□ 1.06
Cchcr1Q8K2I2 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cchcr1Q8K2I2 Gm10493-201ENSMUST00000097270 612 ntBASIC21.66■■□□□ 1.06
Cchcr1Q8K2I2 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cchcr1Q8K2I2 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cchcr1Q8K2I2 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cchcr1Q8K2I2 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cchcr1Q8K2I2 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC21.65■■□□□ 1.06
Cchcr1Q8K2I2 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cchcr1Q8K2I2 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cchcr1Q8K2I2 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cchcr1Q8K2I2 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Cchcr1Q8K2I2 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Cchcr1Q8K2I2 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cchcr1Q8K2I2 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cchcr1Q8K2I2 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cchcr1Q8K2I2 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cchcr1Q8K2I2 AC121961.1-201ENSMUST00000218594 1779 ntBASIC21.64■■□□□ 1.06
Cchcr1Q8K2I2 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cchcr1Q8K2I2 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
Cchcr1Q8K2I2 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC21.64■■□□□ 1.05
Cchcr1Q8K2I2 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cchcr1Q8K2I2 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cchcr1Q8K2I2 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cchcr1Q8K2I2 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cchcr1Q8K2I2 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cchcr1Q8K2I2 Gm38308-201ENSMUST00000194934 1809 ntBASIC21.64■■□□□ 1.05
Cchcr1Q8K2I2 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cchcr1Q8K2I2 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cchcr1Q8K2I2 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cchcr1Q8K2I2 Gm10655-201ENSMUST00000098658 1397 ntBASIC21.63■■□□□ 1.05
Cchcr1Q8K2I2 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Cchcr1Q8K2I2 Gm45141-201ENSMUST00000206502 1888 ntBASIC21.63■■□□□ 1.05
Cchcr1Q8K2I2 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.63■■□□□ 1.05
Cchcr1Q8K2I2 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC21.63■■□□□ 1.05
Cchcr1Q8K2I2 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cchcr1Q8K2I2 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Cchcr1Q8K2I2 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cchcr1Q8K2I2 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cchcr1Q8K2I2 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cchcr1Q8K2I2 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cchcr1Q8K2I2 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cchcr1Q8K2I2 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC21.62■■□□□ 1.05
Cchcr1Q8K2I2 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cchcr1Q8K2I2 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cchcr1Q8K2I2 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cchcr1Q8K2I2 AC131586.2-201ENSMUST00000228370 1512 ntBASIC21.61■■□□□ 1.05
Cchcr1Q8K2I2 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Cchcr1Q8K2I2 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cchcr1Q8K2I2 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC21.61■■□□□ 1.05
Cchcr1Q8K2I2 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cchcr1Q8K2I2 Gm42939-201ENSMUST00000197514 2205 ntBASIC21.61■■□□□ 1.05
Cchcr1Q8K2I2 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cchcr1Q8K2I2 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Cchcr1Q8K2I2 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cchcr1Q8K2I2 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cchcr1Q8K2I2 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cchcr1Q8K2I2 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Cchcr1Q8K2I2 AC099934.2-201ENSMUST00000196389 70 ntBASIC21.6■■□□□ 1.05
Cchcr1Q8K2I2 AC156953.1-201ENSMUST00000196953 70 ntBASIC21.6■■□□□ 1.05
Cchcr1Q8K2I2 AC157822.2-201ENSMUST00000200291 70 ntBASIC21.6■■□□□ 1.05
Cchcr1Q8K2I2 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Cchcr1Q8K2I2 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cchcr1Q8K2I2 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Cchcr1Q8K2I2 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Cchcr1Q8K2I2 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Cchcr1Q8K2I2 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms