Protein–RNA interactions for Protein: Q8K0H1

Slc47a1, Multidrug and toxin extrusion protein 1, mousemouse

Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc47a1Q8K0H1 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Slc47a1Q8K0H1 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Slc47a1Q8K0H1 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.07■□□□□ 0.48
Slc47a1Q8K0H1 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
Slc47a1Q8K0H1 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Slc47a1Q8K0H1 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.07■□□□□ 0.48
Slc47a1Q8K0H1 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc47a1Q8K0H1 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
Slc47a1Q8K0H1 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc47a1Q8K0H1 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc47a1Q8K0H1 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc47a1Q8K0H1 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.07■□□□□ 0.48
Slc47a1Q8K0H1 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Slc47a1Q8K0H1 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.07■□□□□ 0.48
Slc47a1Q8K0H1 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Slc47a1Q8K0H1 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Slc47a1Q8K0H1 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.06■□□□□ 0.48
Slc47a1Q8K0H1 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc47a1Q8K0H1 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc47a1Q8K0H1 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.06■□□□□ 0.48
Slc47a1Q8K0H1 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Slc47a1Q8K0H1 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Slc47a1Q8K0H1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
Slc47a1Q8K0H1 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.06■□□□□ 0.48
Slc47a1Q8K0H1 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc47a1Q8K0H1 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc47a1Q8K0H1 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc47a1Q8K0H1 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Slc47a1Q8K0H1 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc47a1Q8K0H1 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc47a1Q8K0H1 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc47a1Q8K0H1 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc47a1Q8K0H1 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.05■□□□□ 0.48
Slc47a1Q8K0H1 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.05■□□□□ 0.48
Slc47a1Q8K0H1 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.05■□□□□ 0.48
Slc47a1Q8K0H1 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.05■□□□□ 0.48
Slc47a1Q8K0H1 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc47a1Q8K0H1 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.05■□□□□ 0.48
Slc47a1Q8K0H1 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc47a1Q8K0H1 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc47a1Q8K0H1 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc47a1Q8K0H1 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc47a1Q8K0H1 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Slc47a1Q8K0H1 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc47a1Q8K0H1 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.04■□□□□ 0.48
Slc47a1Q8K0H1 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Slc47a1Q8K0H1 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc47a1Q8K0H1 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.04■□□□□ 0.48
Slc47a1Q8K0H1 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.04■□□□□ 0.48
Slc47a1Q8K0H1 Gm38205-201ENSMUST00000192243 258 ntBASIC18.04■□□□□ 0.48
Slc47a1Q8K0H1 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.04■□□□□ 0.48
Slc47a1Q8K0H1 Gm42642-201ENSMUST00000200683 355 ntBASIC18.04■□□□□ 0.48
Slc47a1Q8K0H1 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.04■□□□□ 0.48
Slc47a1Q8K0H1 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Slc47a1Q8K0H1 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc47a1Q8K0H1 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc47a1Q8K0H1 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc47a1Q8K0H1 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc47a1Q8K0H1 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Slc47a1Q8K0H1 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc47a1Q8K0H1 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc47a1Q8K0H1 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc47a1Q8K0H1 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.03■□□□□ 0.48
Slc47a1Q8K0H1 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
Slc47a1Q8K0H1 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.03■□□□□ 0.48
Slc47a1Q8K0H1 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Slc47a1Q8K0H1 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.03■□□□□ 0.48
Slc47a1Q8K0H1 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.03■□□□□ 0.48
Slc47a1Q8K0H1 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc47a1Q8K0H1 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc47a1Q8K0H1 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Slc47a1Q8K0H1 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc47a1Q8K0H1 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc47a1Q8K0H1 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Slc47a1Q8K0H1 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc47a1Q8K0H1 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Slc47a1Q8K0H1 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc47a1Q8K0H1 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Slc47a1Q8K0H1 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc47a1Q8K0H1 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc47a1Q8K0H1 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Slc47a1Q8K0H1 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Slc47a1Q8K0H1 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Slc47a1Q8K0H1 Gm26571-201ENSMUST00000181399 666 ntBASIC18.02■□□□□ 0.48
Slc47a1Q8K0H1 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc47a1Q8K0H1 Reep4-203ENSMUST00000226563 1444 ntBASIC18.02■□□□□ 0.48
Slc47a1Q8K0H1 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.02■□□□□ 0.48
Slc47a1Q8K0H1 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc47a1Q8K0H1 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc47a1Q8K0H1 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc47a1Q8K0H1 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Slc47a1Q8K0H1 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Slc47a1Q8K0H1 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Slc47a1Q8K0H1 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Slc47a1Q8K0H1 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Slc47a1Q8K0H1 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Slc47a1Q8K0H1 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.02■□□□□ 0.47
Slc47a1Q8K0H1 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Slc47a1Q8K0H1 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Slc47a1Q8K0H1 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms