Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgcs1Q8JZK9 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgcs1Q8JZK9 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgcs1Q8JZK9 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.5■□□□□ 0.39
Hmgcs1Q8JZK9 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgcs1Q8JZK9 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgcs1Q8JZK9 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Hmgcs1Q8JZK9 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgcs1Q8JZK9 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgcs1Q8JZK9 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgcs1Q8JZK9 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgcs1Q8JZK9 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmgcs1Q8JZK9 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Hmgcs1Q8JZK9 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmgcs1Q8JZK9 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmgcs1Q8JZK9 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmgcs1Q8JZK9 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmgcs1Q8JZK9 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.49■□□□□ 0.39
Hmgcs1Q8JZK9 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.49■□□□□ 0.39
Hmgcs1Q8JZK9 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Hmgcs1Q8JZK9 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Hmgcs1Q8JZK9 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmgcs1Q8JZK9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmgcs1Q8JZK9 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmgcs1Q8JZK9 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
Hmgcs1Q8JZK9 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Hmgcs1Q8JZK9 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmgcs1Q8JZK9 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Hmgcs1Q8JZK9 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmgcs1Q8JZK9 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmgcs1Q8JZK9 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hmgcs1Q8JZK9 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmgcs1Q8JZK9 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Hmgcs1Q8JZK9 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmgcs1Q8JZK9 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmgcs1Q8JZK9 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmgcs1Q8JZK9 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.48■□□□□ 0.39
Hmgcs1Q8JZK9 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.48■□□□□ 0.39
Hmgcs1Q8JZK9 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Hmgcs1Q8JZK9 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Hmgcs1Q8JZK9 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hmgcs1Q8JZK9 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
Hmgcs1Q8JZK9 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmgcs1Q8JZK9 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmgcs1Q8JZK9 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmgcs1Q8JZK9 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hmgcs1Q8JZK9 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Hmgcs1Q8JZK9 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmgcs1Q8JZK9 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hmgcs1Q8JZK9 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hmgcs1Q8JZK9 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Hmgcs1Q8JZK9 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hmgcs1Q8JZK9 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmgcs1Q8JZK9 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Hmgcs1Q8JZK9 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmgcs1Q8JZK9 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.47■□□□□ 0.39
Hmgcs1Q8JZK9 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmgcs1Q8JZK9 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmgcs1Q8JZK9 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.47■□□□□ 0.39
Hmgcs1Q8JZK9 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hmgcs1Q8JZK9 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Hmgcs1Q8JZK9 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hmgcs1Q8JZK9 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Hmgcs1Q8JZK9 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.46■□□□□ 0.39
Hmgcs1Q8JZK9 Gm13234-201ENSMUST00000120010 747 ntBASIC17.46■□□□□ 0.39
Hmgcs1Q8JZK9 Gm13534-201ENSMUST00000121169 513 ntBASIC17.46■□□□□ 0.39
Hmgcs1Q8JZK9 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Hmgcs1Q8JZK9 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hmgcs1Q8JZK9 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hmgcs1Q8JZK9 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hmgcs1Q8JZK9 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hmgcs1Q8JZK9 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hmgcs1Q8JZK9 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Hmgcs1Q8JZK9 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.46■□□□□ 0.39
Hmgcs1Q8JZK9 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Hmgcs1Q8JZK9 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmgcs1Q8JZK9 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Hmgcs1Q8JZK9 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Hmgcs1Q8JZK9 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmgcs1Q8JZK9 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.45■□□□□ 0.38
Hmgcs1Q8JZK9 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmgcs1Q8JZK9 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmgcs1Q8JZK9 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.45■□□□□ 0.38
Hmgcs1Q8JZK9 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Hmgcs1Q8JZK9 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.45■□□□□ 0.38
Hmgcs1Q8JZK9 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Hmgcs1Q8JZK9 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Hmgcs1Q8JZK9 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.45■□□□□ 0.38
Hmgcs1Q8JZK9 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.45■□□□□ 0.38
Hmgcs1Q8JZK9 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Hmgcs1Q8JZK9 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmgcs1Q8JZK9 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmgcs1Q8JZK9 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmgcs1Q8JZK9 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hmgcs1Q8JZK9 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
Hmgcs1Q8JZK9 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmgcs1Q8JZK9 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmgcs1Q8JZK9 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmgcs1Q8JZK9 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.44■□□□□ 0.38
Hmgcs1Q8JZK9 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms