Protein–RNA interactions for Protein: Q8CH72

Trim32, E3 ubiquitin-protein ligase TRIM32, mousemouse

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim32Q8CH72 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim32Q8CH72 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.6■□□□□ 0.89
Trim32Q8CH72 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim32Q8CH72 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Trim32Q8CH72 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim32Q8CH72 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim32Q8CH72 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Trim32Q8CH72 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.59■□□□□ 0.89
Trim32Q8CH72 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim32Q8CH72 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim32Q8CH72 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trim32Q8CH72 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Trim32Q8CH72 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC20.59■□□□□ 0.89
Trim32Q8CH72 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC20.59■□□□□ 0.89
Trim32Q8CH72 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.59■□□□□ 0.89
Trim32Q8CH72 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim32Q8CH72 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.59■□□□□ 0.89
Trim32Q8CH72 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim32Q8CH72 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim32Q8CH72 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim32Q8CH72 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim32Q8CH72 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim32Q8CH72 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Trim32Q8CH72 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim32Q8CH72 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim32Q8CH72 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Trim32Q8CH72 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Trim32Q8CH72 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim32Q8CH72 Gm7889-201ENSMUST00000185591 958 ntBASIC20.58■□□□□ 0.89
Trim32Q8CH72 Gm44487-201ENSMUST00000205145 325 ntBASIC20.58■□□□□ 0.89
Trim32Q8CH72 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC20.58■□□□□ 0.89
Trim32Q8CH72 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim32Q8CH72 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim32Q8CH72 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Trim32Q8CH72 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim32Q8CH72 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim32Q8CH72 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim32Q8CH72 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
Trim32Q8CH72 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim32Q8CH72 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim32Q8CH72 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.57■□□□□ 0.88
Trim32Q8CH72 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trim32Q8CH72 Gm37292-201ENSMUST00000192062 758 ntBASIC20.57■□□□□ 0.88
Trim32Q8CH72 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.57■□□□□ 0.88
Trim32Q8CH72 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim32Q8CH72 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim32Q8CH72 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Trim32Q8CH72 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim32Q8CH72 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Trim32Q8CH72 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim32Q8CH72 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trim32Q8CH72 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim32Q8CH72 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim32Q8CH72 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim32Q8CH72 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trim32Q8CH72 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim32Q8CH72 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trim32Q8CH72 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim32Q8CH72 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC20.56■□□□□ 0.88
Trim32Q8CH72 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Trim32Q8CH72 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trim32Q8CH72 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim32Q8CH72 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim32Q8CH72 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim32Q8CH72 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.55■□□□□ 0.88
Trim32Q8CH72 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim32Q8CH72 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Trim32Q8CH72 Gm10138-203ENSMUST00000206952 366 ntBASIC20.55■□□□□ 0.88
Trim32Q8CH72 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim32Q8CH72 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC20.55■□□□□ 0.88
Trim32Q8CH72 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20.55■□□□□ 0.88
Trim32Q8CH72 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim32Q8CH72 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim32Q8CH72 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim32Q8CH72 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
Trim32Q8CH72 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim32Q8CH72 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim32Q8CH72 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trim32Q8CH72 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Trim32Q8CH72 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim32Q8CH72 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Trim32Q8CH72 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim32Q8CH72 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim32Q8CH72 Gm15375-201ENSMUST00000119510 849 ntBASIC20.54■□□□□ 0.88
Trim32Q8CH72 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Trim32Q8CH72 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim32Q8CH72 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim32Q8CH72 Gm6659-201ENSMUST00000174752 547 ntBASIC20.53■□□□□ 0.88
Trim32Q8CH72 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC20.53■□□□□ 0.88
Trim32Q8CH72 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim32Q8CH72 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim32Q8CH72 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.53■□□□□ 0.88
Trim32Q8CH72 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim32Q8CH72 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.53■□□□□ 0.88
Trim32Q8CH72 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trim32Q8CH72 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trim32Q8CH72 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.53■□□□□ 0.88
Trim32Q8CH72 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim32Q8CH72 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Trim32Q8CH72 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms