Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Smc4Q8CG47 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC22.6■■□□□ 1.21
Smc4Q8CG47 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Smc4Q8CG47 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
Smc4Q8CG47 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
Smc4Q8CG47 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Smc4Q8CG47 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Smc4Q8CG47 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Smc4Q8CG47 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Smc4Q8CG47 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Smc4Q8CG47 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Smc4Q8CG47 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC22.59■■□□□ 1.21
Smc4Q8CG47 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC22.59■■□□□ 1.21
Smc4Q8CG47 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Smc4Q8CG47 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Smc4Q8CG47 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC22.58■■□□□ 1.21
Smc4Q8CG47 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Smc4Q8CG47 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
Smc4Q8CG47 Zfp783-201ENSMUST00000095946 670 ntBASIC22.58■■□□□ 1.21
Smc4Q8CG47 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Smc4Q8CG47 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Smc4Q8CG47 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.2
Smc4Q8CG47 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Smc4Q8CG47 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Smc4Q8CG47 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Smc4Q8CG47 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
Smc4Q8CG47 AC163280.1-201ENSMUST00000228194 1100 ntBASIC22.57■■□□□ 1.2
Smc4Q8CG47 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Smc4Q8CG47 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Smc4Q8CG47 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Smc4Q8CG47 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Smc4Q8CG47 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Smc4Q8CG47 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Smc4Q8CG47 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Smc4Q8CG47 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Smc4Q8CG47 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Smc4Q8CG47 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Smc4Q8CG47 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Smc4Q8CG47 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Smc4Q8CG47 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Smc4Q8CG47 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
Smc4Q8CG47 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
Smc4Q8CG47 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC22.56■■□□□ 1.2
Smc4Q8CG47 H2-K2-201ENSMUST00000174250 1049 ntBASIC22.56■■□□□ 1.2
Smc4Q8CG47 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Smc4Q8CG47 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Smc4Q8CG47 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC22.56■■□□□ 1.2
Smc4Q8CG47 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC22.56■■□□□ 1.2
Smc4Q8CG47 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Smc4Q8CG47 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Smc4Q8CG47 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Smc4Q8CG47 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Smc4Q8CG47 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Smc4Q8CG47 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Smc4Q8CG47 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Smc4Q8CG47 BC021767-201ENSMUST00000126387 1716 ntBASIC22.55■■□□□ 1.2
Smc4Q8CG47 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Smc4Q8CG47 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
Smc4Q8CG47 Gm15378-201ENSMUST00000121894 207 ntBASIC22.55■■□□□ 1.2
Smc4Q8CG47 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Smc4Q8CG47 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC22.55■■□□□ 1.2
Smc4Q8CG47 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Smc4Q8CG47 Gm15853-202ENSMUST00000195518 2041 ntBASIC22.55■■□□□ 1.2
Smc4Q8CG47 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Smc4Q8CG47 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Smc4Q8CG47 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Smc4Q8CG47 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Smc4Q8CG47 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Smc4Q8CG47 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Smc4Q8CG47 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Smc4Q8CG47 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Smc4Q8CG47 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Smc4Q8CG47 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Smc4Q8CG47 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Smc4Q8CG47 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Smc4Q8CG47 Gm7856-201ENSMUST00000117514 1493 ntBASIC22.54■■□□□ 1.2
Smc4Q8CG47 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Smc4Q8CG47 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC22.53■■□□□ 1.2
Smc4Q8CG47 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Smc4Q8CG47 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Smc4Q8CG47 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC22.53■■□□□ 1.2
Smc4Q8CG47 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Smc4Q8CG47 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Smc4Q8CG47 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Smc4Q8CG47 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC22.53■■□□□ 1.2
Smc4Q8CG47 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Smc4Q8CG47 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Smc4Q8CG47 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Smc4Q8CG47 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Smc4Q8CG47 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Smc4Q8CG47 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Smc4Q8CG47 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC22.52■■□□□ 1.2
Smc4Q8CG47 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC22.52■■□□□ 1.2
Smc4Q8CG47 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Smc4Q8CG47 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
Smc4Q8CG47 Rncr4-201ENSMUST00000194541 2234 ntBASIC22.51■■□□□ 1.19
Smc4Q8CG47 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Smc4Q8CG47 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Smc4Q8CG47 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Smc4Q8CG47 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms