Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Smc5Q8CG46 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Smc5Q8CG46 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Smc5Q8CG46 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Smc5Q8CG46 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Smc5Q8CG46 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Smc5Q8CG46 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Smc5Q8CG46 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Smc5Q8CG46 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Smc5Q8CG46 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Smc5Q8CG46 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Smc5Q8CG46 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Smc5Q8CG46 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Smc5Q8CG46 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Smc5Q8CG46 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC22.72■■□□□ 1.23
Smc5Q8CG46 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Smc5Q8CG46 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Smc5Q8CG46 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Smc5Q8CG46 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Smc5Q8CG46 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Smc5Q8CG46 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC22.71■■□□□ 1.23
Smc5Q8CG46 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Smc5Q8CG46 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Smc5Q8CG46 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
Smc5Q8CG46 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
Smc5Q8CG46 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC22.71■■□□□ 1.23
Smc5Q8CG46 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC22.71■■□□□ 1.23
Smc5Q8CG46 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.23
Smc5Q8CG46 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
Smc5Q8CG46 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
Smc5Q8CG46 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Smc5Q8CG46 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Smc5Q8CG46 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Smc5Q8CG46 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Smc5Q8CG46 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC22.7■■□□□ 1.22
Smc5Q8CG46 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Smc5Q8CG46 Reep4-203ENSMUST00000226563 1444 ntBASIC22.7■■□□□ 1.22
Smc5Q8CG46 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Smc5Q8CG46 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC22.7■■□□□ 1.22
Smc5Q8CG46 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Smc5Q8CG46 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Smc5Q8CG46 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Smc5Q8CG46 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC22.69■■□□□ 1.22
Smc5Q8CG46 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Smc5Q8CG46 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
Smc5Q8CG46 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Smc5Q8CG46 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC22.69■■□□□ 1.22
Smc5Q8CG46 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Smc5Q8CG46 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
Smc5Q8CG46 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Smc5Q8CG46 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Smc5Q8CG46 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Smc5Q8CG46 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Smc5Q8CG46 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Smc5Q8CG46 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Smc5Q8CG46 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Smc5Q8CG46 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC22.68■■□□□ 1.22
Smc5Q8CG46 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Smc5Q8CG46 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC22.68■■□□□ 1.22
Smc5Q8CG46 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Smc5Q8CG46 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Smc5Q8CG46 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Smc5Q8CG46 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Smc5Q8CG46 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Smc5Q8CG46 Gm6598-201ENSMUST00000202719 2615 ntBASIC22.67■■□□□ 1.22
Smc5Q8CG46 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC22.67■■□□□ 1.22
Smc5Q8CG46 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Smc5Q8CG46 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
Smc5Q8CG46 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
Smc5Q8CG46 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Smc5Q8CG46 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
Smc5Q8CG46 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Smc5Q8CG46 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Smc5Q8CG46 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC22.67■■□□□ 1.22
Smc5Q8CG46 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Smc5Q8CG46 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Smc5Q8CG46 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Smc5Q8CG46 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Smc5Q8CG46 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Smc5Q8CG46 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
Smc5Q8CG46 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Smc5Q8CG46 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
Smc5Q8CG46 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Smc5Q8CG46 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Smc5Q8CG46 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC22.66■■□□□ 1.22
Smc5Q8CG46 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Smc5Q8CG46 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Smc5Q8CG46 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Smc5Q8CG46 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Smc5Q8CG46 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Smc5Q8CG46 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
Smc5Q8CG46 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Smc5Q8CG46 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Smc5Q8CG46 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Smc5Q8CG46 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Smc5Q8CG46 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Smc5Q8CG46 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC22.65■■□□□ 1.22
Smc5Q8CG46 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Smc5Q8CG46 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Smc5Q8CG46 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms