Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc38Q8CDN8 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Ccdc38Q8CDN8 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Ccdc38Q8CDN8 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Ccdc38Q8CDN8 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.35■□□□□ 0.85
Ccdc38Q8CDN8 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc38Q8CDN8 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc38Q8CDN8 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc38Q8CDN8 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc38Q8CDN8 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc38Q8CDN8 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
Ccdc38Q8CDN8 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc38Q8CDN8 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc38Q8CDN8 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc38Q8CDN8 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc38Q8CDN8 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.34■□□□□ 0.85
Ccdc38Q8CDN8 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.34■□□□□ 0.85
Ccdc38Q8CDN8 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc38Q8CDN8 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
Ccdc38Q8CDN8 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc38Q8CDN8 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.34■□□□□ 0.85
Ccdc38Q8CDN8 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc38Q8CDN8 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc38Q8CDN8 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
Ccdc38Q8CDN8 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc38Q8CDN8 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.34■□□□□ 0.85
Ccdc38Q8CDN8 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc38Q8CDN8 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc38Q8CDN8 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Ccdc38Q8CDN8 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.34■□□□□ 0.85
Ccdc38Q8CDN8 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ccdc38Q8CDN8 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Ccdc38Q8CDN8 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ccdc38Q8CDN8 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
Ccdc38Q8CDN8 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Ccdc38Q8CDN8 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ccdc38Q8CDN8 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.33■□□□□ 0.85
Ccdc38Q8CDN8 Gm42778-201ENSMUST00000199644 553 ntBASIC20.33■□□□□ 0.85
Ccdc38Q8CDN8 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.33■□□□□ 0.84
Ccdc38Q8CDN8 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ccdc38Q8CDN8 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ccdc38Q8CDN8 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Ccdc38Q8CDN8 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Ccdc38Q8CDN8 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc38Q8CDN8 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc38Q8CDN8 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc38Q8CDN8 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Ccdc38Q8CDN8 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc38Q8CDN8 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.32■□□□□ 0.84
Ccdc38Q8CDN8 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc38Q8CDN8 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc38Q8CDN8 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Ccdc38Q8CDN8 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Ccdc38Q8CDN8 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc38Q8CDN8 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc38Q8CDN8 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.32■□□□□ 0.84
Ccdc38Q8CDN8 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc38Q8CDN8 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc38Q8CDN8 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.31■□□□□ 0.84
Ccdc38Q8CDN8 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Ccdc38Q8CDN8 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
Ccdc38Q8CDN8 Gm19439-201ENSMUST00000198195 2273 ntBASIC20.31■□□□□ 0.84
Ccdc38Q8CDN8 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
Ccdc38Q8CDN8 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.31■□□□□ 0.84
Ccdc38Q8CDN8 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc38Q8CDN8 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc38Q8CDN8 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
Ccdc38Q8CDN8 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.31■□□□□ 0.84
Ccdc38Q8CDN8 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc38Q8CDN8 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc38Q8CDN8 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc38Q8CDN8 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Ccdc38Q8CDN8 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc38Q8CDN8 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc38Q8CDN8 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc38Q8CDN8 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Ccdc38Q8CDN8 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Ccdc38Q8CDN8 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc38Q8CDN8 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.3■□□□□ 0.84
Ccdc38Q8CDN8 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc38Q8CDN8 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc38Q8CDN8 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc38Q8CDN8 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Ccdc38Q8CDN8 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Ccdc38Q8CDN8 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc38Q8CDN8 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc38Q8CDN8 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc38Q8CDN8 Gm10033-202ENSMUST00000211874 928 ntBASIC20.29■□□□□ 0.84
Ccdc38Q8CDN8 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc38Q8CDN8 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc38Q8CDN8 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc38Q8CDN8 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.28■□□□□ 0.84
Ccdc38Q8CDN8 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc38Q8CDN8 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.28■□□□□ 0.84
Ccdc38Q8CDN8 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc38Q8CDN8 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.28■□□□□ 0.84
Ccdc38Q8CDN8 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc38Q8CDN8 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc38Q8CDN8 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc38Q8CDN8 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms