Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Shisa4Q8CA71 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Shisa4Q8CA71 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Shisa4Q8CA71 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC21.42■■□□□ 1.02
Shisa4Q8CA71 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Shisa4Q8CA71 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Shisa4Q8CA71 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Shisa4Q8CA71 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Shisa4Q8CA71 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Shisa4Q8CA71 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Shisa4Q8CA71 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Shisa4Q8CA71 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
Shisa4Q8CA71 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC21.41■■□□□ 1.02
Shisa4Q8CA71 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Shisa4Q8CA71 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Shisa4Q8CA71 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Shisa4Q8CA71 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC21.41■■□□□ 1.02
Shisa4Q8CA71 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Shisa4Q8CA71 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Shisa4Q8CA71 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Shisa4Q8CA71 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Shisa4Q8CA71 Gm9194-201ENSMUST00000220749 1447 ntBASIC21.4■■□□□ 1.02
Shisa4Q8CA71 Gm5953-201ENSMUST00000220644 2616 ntBASIC21.4■■□□□ 1.02
Shisa4Q8CA71 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Shisa4Q8CA71 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC21.4■■□□□ 1.02
Shisa4Q8CA71 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Shisa4Q8CA71 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
Shisa4Q8CA71 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC21.4■■□□□ 1.02
Shisa4Q8CA71 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Shisa4Q8CA71 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Shisa4Q8CA71 Gm38345-201ENSMUST00000192635 1748 ntBASIC21.4■■□□□ 1.02
Shisa4Q8CA71 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Shisa4Q8CA71 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Shisa4Q8CA71 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Shisa4Q8CA71 Gm35558-201ENSMUST00000222675 2219 ntBASIC21.4■■□□□ 1.02
Shisa4Q8CA71 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Shisa4Q8CA71 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Shisa4Q8CA71 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Shisa4Q8CA71 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
Shisa4Q8CA71 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Shisa4Q8CA71 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC21.39■■□□□ 1.02
Shisa4Q8CA71 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Shisa4Q8CA71 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Shisa4Q8CA71 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC21.39■■□□□ 1.01
Shisa4Q8CA71 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC21.39■■□□□ 1.01
Shisa4Q8CA71 Gm13168-201ENSMUST00000121771 632 ntBASIC21.39■■□□□ 1.01
Shisa4Q8CA71 AC135963.1-201ENSMUST00000211640 717 ntBASIC21.39■■□□□ 1.01
Shisa4Q8CA71 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Shisa4Q8CA71 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Shisa4Q8CA71 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Shisa4Q8CA71 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Shisa4Q8CA71 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC21.39■■□□□ 1.01
Shisa4Q8CA71 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Shisa4Q8CA71 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Shisa4Q8CA71 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Shisa4Q8CA71 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC21.38■■□□□ 1.01
Shisa4Q8CA71 Gm2399-201ENSMUST00000104944 225 ntBASIC21.38■■□□□ 1.01
Shisa4Q8CA71 Gm11249-201ENSMUST00000117071 859 ntBASIC21.38■■□□□ 1.01
Shisa4Q8CA71 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Shisa4Q8CA71 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC21.38■■□□□ 1.01
Shisa4Q8CA71 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC21.38■■□□□ 1.01
Shisa4Q8CA71 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Shisa4Q8CA71 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Shisa4Q8CA71 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Shisa4Q8CA71 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC21.38■■□□□ 1.01
Shisa4Q8CA71 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Shisa4Q8CA71 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Shisa4Q8CA71 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Shisa4Q8CA71 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Shisa4Q8CA71 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Shisa4Q8CA71 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
Shisa4Q8CA71 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Shisa4Q8CA71 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Shisa4Q8CA71 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC21.37■■□□□ 1.01
Shisa4Q8CA71 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Shisa4Q8CA71 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Shisa4Q8CA71 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Shisa4Q8CA71 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Shisa4Q8CA71 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Shisa4Q8CA71 Fst-202ENSMUST00000223640 2612 ntBASIC21.37■■□□□ 1.01
Shisa4Q8CA71 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Shisa4Q8CA71 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Shisa4Q8CA71 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Shisa4Q8CA71 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Shisa4Q8CA71 Gm44544-201ENSMUST00000207052 1844 ntBASIC21.36■■□□□ 1.01
Shisa4Q8CA71 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Shisa4Q8CA71 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Shisa4Q8CA71 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
Shisa4Q8CA71 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC21.36■■□□□ 1.01
Shisa4Q8CA71 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Shisa4Q8CA71 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Shisa4Q8CA71 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Shisa4Q8CA71 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Shisa4Q8CA71 Fam105a-203ENSMUST00000226170 3043 ntBASIC21.36■■□□□ 1.01
Shisa4Q8CA71 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Shisa4Q8CA71 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Shisa4Q8CA71 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Shisa4Q8CA71 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
Shisa4Q8CA71 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC21.35■■□□□ 1.01
Shisa4Q8CA71 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms