Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Col6a6Q8C6K9 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col6a6Q8C6K9 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col6a6Q8C6K9 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col6a6Q8C6K9 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col6a6Q8C6K9 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col6a6Q8C6K9 Gm6345-202ENSMUST00000180900 204 ntBASIC16.53■□□□□ 0.24
Col6a6Q8C6K9 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.53■□□□□ 0.24
Col6a6Q8C6K9 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col6a6Q8C6K9 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Col6a6Q8C6K9 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col6a6Q8C6K9 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col6a6Q8C6K9 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col6a6Q8C6K9 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Col6a6Q8C6K9 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.53■□□□□ 0.24
Col6a6Q8C6K9 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col6a6Q8C6K9 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Col6a6Q8C6K9 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
Col6a6Q8C6K9 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.52■□□□□ 0.24
Col6a6Q8C6K9 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col6a6Q8C6K9 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Col6a6Q8C6K9 Gm10013-201ENSMUST00000106074 672 ntBASIC16.52■□□□□ 0.24
Col6a6Q8C6K9 Gm18032-201ENSMUST00000222541 538 ntBASIC16.52■□□□□ 0.24
Col6a6Q8C6K9 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col6a6Q8C6K9 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col6a6Q8C6K9 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col6a6Q8C6K9 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.52■□□□□ 0.24
Col6a6Q8C6K9 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col6a6Q8C6K9 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col6a6Q8C6K9 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Col6a6Q8C6K9 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col6a6Q8C6K9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col6a6Q8C6K9 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Col6a6Q8C6K9 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col6a6Q8C6K9 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col6a6Q8C6K9 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Col6a6Q8C6K9 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Col6a6Q8C6K9 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col6a6Q8C6K9 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Col6a6Q8C6K9 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Col6a6Q8C6K9 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
Col6a6Q8C6K9 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.52■□□□□ 0.23
Col6a6Q8C6K9 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col6a6Q8C6K9 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.51■□□□□ 0.23
Col6a6Q8C6K9 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col6a6Q8C6K9 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.51■□□□□ 0.23
Col6a6Q8C6K9 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col6a6Q8C6K9 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col6a6Q8C6K9 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col6a6Q8C6K9 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.51■□□□□ 0.23
Col6a6Q8C6K9 Gm10138-203ENSMUST00000206952 366 ntBASIC16.51■□□□□ 0.23
Col6a6Q8C6K9 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.51■□□□□ 0.23
Col6a6Q8C6K9 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col6a6Q8C6K9 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Col6a6Q8C6K9 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Col6a6Q8C6K9 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Col6a6Q8C6K9 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col6a6Q8C6K9 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col6a6Q8C6K9 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col6a6Q8C6K9 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col6a6Q8C6K9 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
Col6a6Q8C6K9 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col6a6Q8C6K9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col6a6Q8C6K9 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col6a6Q8C6K9 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col6a6Q8C6K9 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col6a6Q8C6K9 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col6a6Q8C6K9 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Col6a6Q8C6K9 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col6a6Q8C6K9 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.5■□□□□ 0.23
Col6a6Q8C6K9 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col6a6Q8C6K9 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col6a6Q8C6K9 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col6a6Q8C6K9 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col6a6Q8C6K9 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col6a6Q8C6K9 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col6a6Q8C6K9 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col6a6Q8C6K9 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col6a6Q8C6K9 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col6a6Q8C6K9 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col6a6Q8C6K9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Col6a6Q8C6K9 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col6a6Q8C6K9 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col6a6Q8C6K9 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col6a6Q8C6K9 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Col6a6Q8C6K9 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col6a6Q8C6K9 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col6a6Q8C6K9 Gm37292-201ENSMUST00000192062 758 ntBASIC16.49■□□□□ 0.23
Col6a6Q8C6K9 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col6a6Q8C6K9 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col6a6Q8C6K9 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col6a6Q8C6K9 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col6a6Q8C6K9 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col6a6Q8C6K9 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col6a6Q8C6K9 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.48■□□□□ 0.23
Col6a6Q8C6K9 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col6a6Q8C6K9 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col6a6Q8C6K9 Gm12382-201ENSMUST00000122005 922 ntBASIC16.48■□□□□ 0.23
Col6a6Q8C6K9 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col6a6Q8C6K9 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms