Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rft1Q8C3B8 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rft1Q8C3B8 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rft1Q8C3B8 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rft1Q8C3B8 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rft1Q8C3B8 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Rft1Q8C3B8 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rft1Q8C3B8 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Rft1Q8C3B8 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rft1Q8C3B8 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.32■□□□□ 0.2
Rft1Q8C3B8 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rft1Q8C3B8 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Rft1Q8C3B8 Gm8495-201ENSMUST00000188740 694 ntBASIC16.32■□□□□ 0.2
Rft1Q8C3B8 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.32■□□□□ 0.2
Rft1Q8C3B8 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.32■□□□□ 0.2
Rft1Q8C3B8 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rft1Q8C3B8 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rft1Q8C3B8 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rft1Q8C3B8 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rft1Q8C3B8 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rft1Q8C3B8 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.32■□□□□ 0.2
Rft1Q8C3B8 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rft1Q8C3B8 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rft1Q8C3B8 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rft1Q8C3B8 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Rft1Q8C3B8 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rft1Q8C3B8 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rft1Q8C3B8 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rft1Q8C3B8 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rft1Q8C3B8 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.31■□□□□ 0.2
Rft1Q8C3B8 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rft1Q8C3B8 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Rft1Q8C3B8 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rft1Q8C3B8 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rft1Q8C3B8 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rft1Q8C3B8 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rft1Q8C3B8 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rft1Q8C3B8 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Rft1Q8C3B8 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rft1Q8C3B8 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
Rft1Q8C3B8 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rft1Q8C3B8 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rft1Q8C3B8 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Rft1Q8C3B8 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rft1Q8C3B8 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rft1Q8C3B8 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rft1Q8C3B8 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rft1Q8C3B8 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.3■□□□□ 0.2
Rft1Q8C3B8 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.3■□□□□ 0.2
Rft1Q8C3B8 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.3■□□□□ 0.2
Rft1Q8C3B8 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rft1Q8C3B8 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rft1Q8C3B8 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rft1Q8C3B8 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rft1Q8C3B8 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rft1Q8C3B8 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rft1Q8C3B8 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rft1Q8C3B8 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rft1Q8C3B8 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rft1Q8C3B8 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rft1Q8C3B8 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.29■□□□□ 0.2
Rft1Q8C3B8 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rft1Q8C3B8 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rft1Q8C3B8 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rft1Q8C3B8 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Rft1Q8C3B8 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rft1Q8C3B8 Gm5874-201ENSMUST00000096101 508 ntBASIC16.29■□□□□ 0.2
Rft1Q8C3B8 Gm10493-201ENSMUST00000097270 612 ntBASIC16.29■□□□□ 0.2
Rft1Q8C3B8 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rft1Q8C3B8 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rft1Q8C3B8 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rft1Q8C3B8 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rft1Q8C3B8 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rft1Q8C3B8 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rft1Q8C3B8 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Rft1Q8C3B8 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rft1Q8C3B8 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Rft1Q8C3B8 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rft1Q8C3B8 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.28■□□□□ 0.2
Rft1Q8C3B8 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rft1Q8C3B8 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rft1Q8C3B8 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rft1Q8C3B8 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rft1Q8C3B8 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
Rft1Q8C3B8 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rft1Q8C3B8 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Rft1Q8C3B8 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rft1Q8C3B8 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rft1Q8C3B8 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rft1Q8C3B8 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Rft1Q8C3B8 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rft1Q8C3B8 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rft1Q8C3B8 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rft1Q8C3B8 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Rft1Q8C3B8 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rft1Q8C3B8 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.27■□□□□ 0.2
Rft1Q8C3B8 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.27■□□□□ 0.2
Rft1Q8C3B8 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.27■□□□□ 0.2
Rft1Q8C3B8 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Rft1Q8C3B8 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms