Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sh3rf3Q8C120 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sh3rf3Q8C120 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sh3rf3Q8C120 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.08■□□□□ 0.64
Sh3rf3Q8C120 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sh3rf3Q8C120 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Sh3rf3Q8C120 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sh3rf3Q8C120 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Sh3rf3Q8C120 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
Sh3rf3Q8C120 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sh3rf3Q8C120 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sh3rf3Q8C120 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.07■□□□□ 0.64
Sh3rf3Q8C120 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sh3rf3Q8C120 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Sh3rf3Q8C120 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.07■□□□□ 0.64
Sh3rf3Q8C120 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sh3rf3Q8C120 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Sh3rf3Q8C120 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3rf3Q8C120 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3rf3Q8C120 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3rf3Q8C120 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3rf3Q8C120 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Sh3rf3Q8C120 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3rf3Q8C120 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.06■□□□□ 0.64
Sh3rf3Q8C120 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3rf3Q8C120 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3rf3Q8C120 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3rf3Q8C120 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3rf3Q8C120 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3rf3Q8C120 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3rf3Q8C120 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.05■□□□□ 0.64
Sh3rf3Q8C120 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3rf3Q8C120 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3rf3Q8C120 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Sh3rf3Q8C120 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Sh3rf3Q8C120 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3rf3Q8C120 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.05■□□□□ 0.64
Sh3rf3Q8C120 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
Sh3rf3Q8C120 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3rf3Q8C120 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3rf3Q8C120 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3rf3Q8C120 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3rf3Q8C120 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3rf3Q8C120 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3rf3Q8C120 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3rf3Q8C120 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.04■□□□□ 0.64
Sh3rf3Q8C120 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3rf3Q8C120 Gm27405-201ENSMUST00000184201 112 ntBASIC19.04■□□□□ 0.64
Sh3rf3Q8C120 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.04■□□□□ 0.64
Sh3rf3Q8C120 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3rf3Q8C120 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3rf3Q8C120 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3rf3Q8C120 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3rf3Q8C120 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.03■□□□□ 0.64
Sh3rf3Q8C120 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sh3rf3Q8C120 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Sh3rf3Q8C120 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.03■□□□□ 0.64
Sh3rf3Q8C120 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.03■□□□□ 0.64
Sh3rf3Q8C120 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sh3rf3Q8C120 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Sh3rf3Q8C120 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sh3rf3Q8C120 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sh3rf3Q8C120 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.03■□□□□ 0.64
Sh3rf3Q8C120 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sh3rf3Q8C120 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sh3rf3Q8C120 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sh3rf3Q8C120 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sh3rf3Q8C120 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Sh3rf3Q8C120 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.02■□□□□ 0.64
Sh3rf3Q8C120 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sh3rf3Q8C120 Gm7291-201ENSMUST00000199147 382 ntBASIC19.02■□□□□ 0.64
Sh3rf3Q8C120 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.02■□□□□ 0.64
Sh3rf3Q8C120 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sh3rf3Q8C120 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sh3rf3Q8C120 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sh3rf3Q8C120 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.01■□□□□ 0.63
Sh3rf3Q8C120 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Sh3rf3Q8C120 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sh3rf3Q8C120 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sh3rf3Q8C120 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sh3rf3Q8C120 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Sh3rf3Q8C120 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Sh3rf3Q8C120 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Sh3rf3Q8C120 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Sh3rf3Q8C120 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.01■□□□□ 0.63
Sh3rf3Q8C120 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.01■□□□□ 0.63
Sh3rf3Q8C120 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sh3rf3Q8C120 Gm6365-201ENSMUST00000054711 744 ntBASIC19.01■□□□□ 0.63
Sh3rf3Q8C120 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sh3rf3Q8C120 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Sh3rf3Q8C120 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sh3rf3Q8C120 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sh3rf3Q8C120 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3rf3Q8C120 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19■□□□□ 0.63
Sh3rf3Q8C120 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19■□□□□ 0.63
Sh3rf3Q8C120 Dmtn-207ENSMUST00000228001 2437 ntBASIC19■□□□□ 0.63
Sh3rf3Q8C120 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Sh3rf3Q8C120 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19■□□□□ 0.63
Sh3rf3Q8C120 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19■□□□□ 0.63
Sh3rf3Q8C120 Gm42555-201ENSMUST00000199304 1039 ntBASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms