Protein–RNA interactions for Protein: Q8C0S4

Ttc21a, Tetratricopeptide repeat protein 21A, mousemouse

Predictions only

Length 1,314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc21aQ8C0S4 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Ttc21aQ8C0S4 Dmtn-210ENSMUST00000228824 2377 ntBASIC23.41■■□□□ 1.34
Ttc21aQ8C0S4 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Ttc21aQ8C0S4 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ttc21aQ8C0S4 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
Ttc21aQ8C0S4 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Ttc21aQ8C0S4 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ttc21aQ8C0S4 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ttc21aQ8C0S4 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ttc21aQ8C0S4 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ttc21aQ8C0S4 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC23.4■■□□□ 1.34
Ttc21aQ8C0S4 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC23.4■■□□□ 1.34
Ttc21aQ8C0S4 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ttc21aQ8C0S4 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ttc21aQ8C0S4 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC23.39■■□□□ 1.34
Ttc21aQ8C0S4 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
Ttc21aQ8C0S4 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Ttc21aQ8C0S4 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC23.39■■□□□ 1.34
Ttc21aQ8C0S4 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC23.39■■□□□ 1.34
Ttc21aQ8C0S4 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Ttc21aQ8C0S4 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
Ttc21aQ8C0S4 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
Ttc21aQ8C0S4 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Ttc21aQ8C0S4 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ttc21aQ8C0S4 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC23.38■■□□□ 1.33
Ttc21aQ8C0S4 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC23.38■■□□□ 1.33
Ttc21aQ8C0S4 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ttc21aQ8C0S4 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ttc21aQ8C0S4 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ttc21aQ8C0S4 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ttc21aQ8C0S4 Gm12896-201ENSMUST00000118430 226 ntBASIC23.37■■□□□ 1.33
Ttc21aQ8C0S4 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ttc21aQ8C0S4 Gm2559-201ENSMUST00000201323 363 ntBASIC23.37■■□□□ 1.33
Ttc21aQ8C0S4 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC23.37■■□□□ 1.33
Ttc21aQ8C0S4 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ttc21aQ8C0S4 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ttc21aQ8C0S4 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ttc21aQ8C0S4 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ttc21aQ8C0S4 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ttc21aQ8C0S4 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ttc21aQ8C0S4 Gm44544-201ENSMUST00000207052 1844 ntBASIC23.37■■□□□ 1.33
Ttc21aQ8C0S4 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC23.36■■□□□ 1.33
Ttc21aQ8C0S4 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Ttc21aQ8C0S4 Gm27275-201ENSMUST00000184318 272 ntBASIC23.36■■□□□ 1.33
Ttc21aQ8C0S4 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ttc21aQ8C0S4 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Ttc21aQ8C0S4 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Ttc21aQ8C0S4 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC23.36■■□□□ 1.33
Ttc21aQ8C0S4 Tgds-204ENSMUST00000228543 1594 ntBASIC23.36■■□□□ 1.33
Ttc21aQ8C0S4 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ttc21aQ8C0S4 Gm35558-201ENSMUST00000222675 2219 ntBASIC23.36■■□□□ 1.33
Ttc21aQ8C0S4 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ttc21aQ8C0S4 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ttc21aQ8C0S4 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Ttc21aQ8C0S4 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC23.35■■□□□ 1.33
Ttc21aQ8C0S4 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ttc21aQ8C0S4 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC23.35■■□□□ 1.33
Ttc21aQ8C0S4 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ttc21aQ8C0S4 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ttc21aQ8C0S4 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
Ttc21aQ8C0S4 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ttc21aQ8C0S4 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ttc21aQ8C0S4 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ttc21aQ8C0S4 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
Ttc21aQ8C0S4 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC23.35■■□□□ 1.33
Ttc21aQ8C0S4 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ttc21aQ8C0S4 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ttc21aQ8C0S4 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC23.34■■□□□ 1.33
Ttc21aQ8C0S4 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC23.34■■□□□ 1.33
Ttc21aQ8C0S4 Gm37856-201ENSMUST00000191634 999 ntBASIC23.34■■□□□ 1.33
Ttc21aQ8C0S4 Gm38285-201ENSMUST00000192928 922 ntBASIC23.34■■□□□ 1.33
Ttc21aQ8C0S4 Zfp783-201ENSMUST00000095946 670 ntBASIC23.34■■□□□ 1.33
Ttc21aQ8C0S4 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ttc21aQ8C0S4 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC23.34■■□□□ 1.33
Ttc21aQ8C0S4 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ttc21aQ8C0S4 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC23.33■■□□□ 1.33
Ttc21aQ8C0S4 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Ttc21aQ8C0S4 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
Ttc21aQ8C0S4 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC23.33■■□□□ 1.33
Ttc21aQ8C0S4 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Ttc21aQ8C0S4 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Ttc21aQ8C0S4 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
Ttc21aQ8C0S4 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
Ttc21aQ8C0S4 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Ttc21aQ8C0S4 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.32
Ttc21aQ8C0S4 Gm11249-201ENSMUST00000117071 859 ntBASIC23.33■■□□□ 1.32
Ttc21aQ8C0S4 Gm10653-202ENSMUST00000139570 835 ntBASIC23.33■■□□□ 1.32
Ttc21aQ8C0S4 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Ttc21aQ8C0S4 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ttc21aQ8C0S4 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Ttc21aQ8C0S4 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Ttc21aQ8C0S4 Gm11927-201ENSMUST00000118472 759 ntBASIC23.32■■□□□ 1.32
Ttc21aQ8C0S4 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Ttc21aQ8C0S4 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC23.32■■□□□ 1.32
Ttc21aQ8C0S4 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ttc21aQ8C0S4 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Ttc21aQ8C0S4 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Ttc21aQ8C0S4 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ttc21aQ8C0S4 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ttc21aQ8C0S4 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms