Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp43Q8BUM9 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp43Q8BUM9 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp43Q8BUM9 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp43Q8BUM9 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp43Q8BUM9 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.56■□□□□ 0.56
Usp43Q8BUM9 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp43Q8BUM9 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.55■□□□□ 0.56
Usp43Q8BUM9 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp43Q8BUM9 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp43Q8BUM9 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp43Q8BUM9 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Usp43Q8BUM9 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.55■□□□□ 0.56
Usp43Q8BUM9 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp43Q8BUM9 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.55■□□□□ 0.56
Usp43Q8BUM9 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Usp43Q8BUM9 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Usp43Q8BUM9 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Usp43Q8BUM9 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Usp43Q8BUM9 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp43Q8BUM9 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp43Q8BUM9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp43Q8BUM9 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Usp43Q8BUM9 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Usp43Q8BUM9 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Usp43Q8BUM9 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.54■□□□□ 0.56
Usp43Q8BUM9 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Usp43Q8BUM9 Gm6211-202ENSMUST00000167849 925 ntBASIC18.54■□□□□ 0.56
Usp43Q8BUM9 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Usp43Q8BUM9 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.54■□□□□ 0.56
Usp43Q8BUM9 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Usp43Q8BUM9 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Usp43Q8BUM9 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Usp43Q8BUM9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Usp43Q8BUM9 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.54■□□□□ 0.56
Usp43Q8BUM9 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Usp43Q8BUM9 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Usp43Q8BUM9 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.54■□□□□ 0.56
Usp43Q8BUM9 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Usp43Q8BUM9 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp43Q8BUM9 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp43Q8BUM9 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp43Q8BUM9 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp43Q8BUM9 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp43Q8BUM9 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp43Q8BUM9 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.53■□□□□ 0.56
Usp43Q8BUM9 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Usp43Q8BUM9 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.53■□□□□ 0.56
Usp43Q8BUM9 Gm37179-201ENSMUST00000194862 823 ntBASIC18.53■□□□□ 0.56
Usp43Q8BUM9 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Usp43Q8BUM9 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Usp43Q8BUM9 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp43Q8BUM9 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
Usp43Q8BUM9 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp43Q8BUM9 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp43Q8BUM9 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Usp43Q8BUM9 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Usp43Q8BUM9 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Usp43Q8BUM9 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Usp43Q8BUM9 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Usp43Q8BUM9 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Usp43Q8BUM9 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Usp43Q8BUM9 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Usp43Q8BUM9 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.52■□□□□ 0.56
Usp43Q8BUM9 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.52■□□□□ 0.56
Usp43Q8BUM9 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Usp43Q8BUM9 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Usp43Q8BUM9 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Usp43Q8BUM9 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Usp43Q8BUM9 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Usp43Q8BUM9 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.52■□□□□ 0.55
Usp43Q8BUM9 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Usp43Q8BUM9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Usp43Q8BUM9 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Usp43Q8BUM9 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp43Q8BUM9 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp43Q8BUM9 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.51■□□□□ 0.55
Usp43Q8BUM9 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp43Q8BUM9 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp43Q8BUM9 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.51■□□□□ 0.55
Usp43Q8BUM9 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.51■□□□□ 0.55
Usp43Q8BUM9 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp43Q8BUM9 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp43Q8BUM9 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp43Q8BUM9 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Usp43Q8BUM9 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.51■□□□□ 0.55
Usp43Q8BUM9 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp43Q8BUM9 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.51■□□□□ 0.55
Usp43Q8BUM9 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Usp43Q8BUM9 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp43Q8BUM9 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp43Q8BUM9 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp43Q8BUM9 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Usp43Q8BUM9 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp43Q8BUM9 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Usp43Q8BUM9 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Usp43Q8BUM9 Gm13148-201ENSMUST00000118892 745 ntBASIC18.5■□□□□ 0.55
Usp43Q8BUM9 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Usp43Q8BUM9 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.5■□□□□ 0.55
Usp43Q8BUM9 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms