Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cdk5rap1Q8BTW8 Gm13158-201ENSMUST00000122007 736 ntBASIC17.36■□□□□ 0.37
Cdk5rap1Q8BTW8 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdk5rap1Q8BTW8 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Cdk5rap1Q8BTW8 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.36■□□□□ 0.37
Cdk5rap1Q8BTW8 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.36■□□□□ 0.37
Cdk5rap1Q8BTW8 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdk5rap1Q8BTW8 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdk5rap1Q8BTW8 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Cdk5rap1Q8BTW8 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdk5rap1Q8BTW8 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cdk5rap1Q8BTW8 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Cdk5rap1Q8BTW8 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cdk5rap1Q8BTW8 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.36■□□□□ 0.37
Cdk5rap1Q8BTW8 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.36■□□□□ 0.37
Cdk5rap1Q8BTW8 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdk5rap1Q8BTW8 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cdk5rap1Q8BTW8 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdk5rap1Q8BTW8 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdk5rap1Q8BTW8 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdk5rap1Q8BTW8 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.35■□□□□ 0.37
Cdk5rap1Q8BTW8 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdk5rap1Q8BTW8 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdk5rap1Q8BTW8 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdk5rap1Q8BTW8 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.35■□□□□ 0.37
Cdk5rap1Q8BTW8 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cdk5rap1Q8BTW8 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdk5rap1Q8BTW8 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cdk5rap1Q8BTW8 Gm11927-201ENSMUST00000118472 759 ntBASIC17.34■□□□□ 0.37
Cdk5rap1Q8BTW8 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Cdk5rap1Q8BTW8 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.34■□□□□ 0.37
Cdk5rap1Q8BTW8 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.34■□□□□ 0.37
Cdk5rap1Q8BTW8 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdk5rap1Q8BTW8 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cdk5rap1Q8BTW8 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdk5rap1Q8BTW8 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.34■□□□□ 0.37
Cdk5rap1Q8BTW8 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdk5rap1Q8BTW8 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdk5rap1Q8BTW8 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdk5rap1Q8BTW8 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.34■□□□□ 0.37
Cdk5rap1Q8BTW8 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdk5rap1Q8BTW8 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Cdk5rap1Q8BTW8 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.34■□□□□ 0.37
Cdk5rap1Q8BTW8 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdk5rap1Q8BTW8 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cdk5rap1Q8BTW8 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Cdk5rap1Q8BTW8 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.33■□□□□ 0.37
Cdk5rap1Q8BTW8 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdk5rap1Q8BTW8 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdk5rap1Q8BTW8 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Cdk5rap1Q8BTW8 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdk5rap1Q8BTW8 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.33■□□□□ 0.36
Cdk5rap1Q8BTW8 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.33■□□□□ 0.36
Cdk5rap1Q8BTW8 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Cdk5rap1Q8BTW8 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.33■□□□□ 0.36
Cdk5rap1Q8BTW8 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdk5rap1Q8BTW8 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdk5rap1Q8BTW8 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdk5rap1Q8BTW8 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdk5rap1Q8BTW8 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdk5rap1Q8BTW8 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdk5rap1Q8BTW8 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdk5rap1Q8BTW8 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Cdk5rap1Q8BTW8 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdk5rap1Q8BTW8 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.32■□□□□ 0.36
Cdk5rap1Q8BTW8 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdk5rap1Q8BTW8 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdk5rap1Q8BTW8 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdk5rap1Q8BTW8 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdk5rap1Q8BTW8 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdk5rap1Q8BTW8 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.32■□□□□ 0.36
Cdk5rap1Q8BTW8 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Cdk5rap1Q8BTW8 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdk5rap1Q8BTW8 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdk5rap1Q8BTW8 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.32■□□□□ 0.36
Cdk5rap1Q8BTW8 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdk5rap1Q8BTW8 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.32■□□□□ 0.36
Cdk5rap1Q8BTW8 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdk5rap1Q8BTW8 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdk5rap1Q8BTW8 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Cdk5rap1Q8BTW8 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cdk5rap1Q8BTW8 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdk5rap1Q8BTW8 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.31■□□□□ 0.36
Cdk5rap1Q8BTW8 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.31■□□□□ 0.36
Cdk5rap1Q8BTW8 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.31■□□□□ 0.36
Cdk5rap1Q8BTW8 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cdk5rap1Q8BTW8 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Cdk5rap1Q8BTW8 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
Cdk5rap1Q8BTW8 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdk5rap1Q8BTW8 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdk5rap1Q8BTW8 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdk5rap1Q8BTW8 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.3■□□□□ 0.36
Cdk5rap1Q8BTW8 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cdk5rap1Q8BTW8 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Cdk5rap1Q8BTW8 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Cdk5rap1Q8BTW8 Zfp783-201ENSMUST00000095946 670 ntBASIC17.3■□□□□ 0.36
Cdk5rap1Q8BTW8 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdk5rap1Q8BTW8 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cdk5rap1Q8BTW8 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdk5rap1Q8BTW8 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms