Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scfd1Q8BRF7 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Scfd1Q8BRF7 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
Scfd1Q8BRF7 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scfd1Q8BRF7 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC21.01■□□□□ 0.95
Scfd1Q8BRF7 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC21■□□□□ 0.95
Scfd1Q8BRF7 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Scfd1Q8BRF7 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC21■□□□□ 0.95
Scfd1Q8BRF7 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Scfd1Q8BRF7 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Scfd1Q8BRF7 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC21■□□□□ 0.95
Scfd1Q8BRF7 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Scfd1Q8BRF7 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC21■□□□□ 0.95
Scfd1Q8BRF7 Gm29241-201ENSMUST00000189260 1096 ntBASIC21■□□□□ 0.95
Scfd1Q8BRF7 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC21■□□□□ 0.95
Scfd1Q8BRF7 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scfd1Q8BRF7 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scfd1Q8BRF7 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Scfd1Q8BRF7 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Scfd1Q8BRF7 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Scfd1Q8BRF7 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scfd1Q8BRF7 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Scfd1Q8BRF7 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scfd1Q8BRF7 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Scfd1Q8BRF7 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scfd1Q8BRF7 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scfd1Q8BRF7 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Scfd1Q8BRF7 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scfd1Q8BRF7 Gm715-201ENSMUST00000117865 831 ntBASIC20.98■□□□□ 0.95
Scfd1Q8BRF7 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scfd1Q8BRF7 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.98■□□□□ 0.95
Scfd1Q8BRF7 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scfd1Q8BRF7 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scfd1Q8BRF7 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scfd1Q8BRF7 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scfd1Q8BRF7 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Scfd1Q8BRF7 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.98■□□□□ 0.95
Scfd1Q8BRF7 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scfd1Q8BRF7 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scfd1Q8BRF7 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Scfd1Q8BRF7 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Scfd1Q8BRF7 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scfd1Q8BRF7 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scfd1Q8BRF7 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.97■□□□□ 0.95
Scfd1Q8BRF7 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scfd1Q8BRF7 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scfd1Q8BRF7 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scfd1Q8BRF7 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC20.97■□□□□ 0.95
Scfd1Q8BRF7 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scfd1Q8BRF7 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Scfd1Q8BRF7 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scfd1Q8BRF7 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scfd1Q8BRF7 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scfd1Q8BRF7 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scfd1Q8BRF7 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scfd1Q8BRF7 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scfd1Q8BRF7 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Scfd1Q8BRF7 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.96■□□□□ 0.95
Scfd1Q8BRF7 Gm15375-201ENSMUST00000119510 849 ntBASIC20.96■□□□□ 0.95
Scfd1Q8BRF7 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.96■□□□□ 0.95
Scfd1Q8BRF7 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.96■□□□□ 0.95
Scfd1Q8BRF7 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scfd1Q8BRF7 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.96■□□□□ 0.95
Scfd1Q8BRF7 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scfd1Q8BRF7 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Scfd1Q8BRF7 Gm44544-201ENSMUST00000207052 1844 ntBASIC20.95■□□□□ 0.94
Scfd1Q8BRF7 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC20.95■□□□□ 0.94
Scfd1Q8BRF7 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.95■□□□□ 0.94
Scfd1Q8BRF7 AL672049.1-201ENSMUST00000197943 91 ntBASIC20.95■□□□□ 0.94
Scfd1Q8BRF7 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Scfd1Q8BRF7 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Scfd1Q8BRF7 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Scfd1Q8BRF7 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Scfd1Q8BRF7 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Scfd1Q8BRF7 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Scfd1Q8BRF7 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Scfd1Q8BRF7 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Scfd1Q8BRF7 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Scfd1Q8BRF7 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Scfd1Q8BRF7 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
Scfd1Q8BRF7 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Scfd1Q8BRF7 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Scfd1Q8BRF7 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scfd1Q8BRF7 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scfd1Q8BRF7 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scfd1Q8BRF7 Gm45560-201ENSMUST00000211492 1472 ntBASIC20.94■□□□□ 0.94
Scfd1Q8BRF7 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Scfd1Q8BRF7 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scfd1Q8BRF7 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scfd1Q8BRF7 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Scfd1Q8BRF7 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scfd1Q8BRF7 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scfd1Q8BRF7 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Scfd1Q8BRF7 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scfd1Q8BRF7 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Scfd1Q8BRF7 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.93■□□□□ 0.94
Scfd1Q8BRF7 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.93■□□□□ 0.94
Scfd1Q8BRF7 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scfd1Q8BRF7 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Scfd1Q8BRF7 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms