Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.76■□□□□ 0.59
Suds3Q8BR65 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Suds3Q8BR65 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Suds3Q8BR65 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Suds3Q8BR65 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Suds3Q8BR65 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Suds3Q8BR65 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Suds3Q8BR65 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Suds3Q8BR65 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Suds3Q8BR65 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Suds3Q8BR65 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Suds3Q8BR65 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Suds3Q8BR65 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Suds3Q8BR65 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Suds3Q8BR65 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Suds3Q8BR65 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Suds3Q8BR65 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.75■□□□□ 0.59
Suds3Q8BR65 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Suds3Q8BR65 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Suds3Q8BR65 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Suds3Q8BR65 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Suds3Q8BR65 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Suds3Q8BR65 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Suds3Q8BR65 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Suds3Q8BR65 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Suds3Q8BR65 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Suds3Q8BR65 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.74■□□□□ 0.59
Suds3Q8BR65 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Suds3Q8BR65 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Suds3Q8BR65 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Suds3Q8BR65 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Suds3Q8BR65 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Suds3Q8BR65 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Suds3Q8BR65 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.74■□□□□ 0.59
Suds3Q8BR65 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.74■□□□□ 0.59
Suds3Q8BR65 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Suds3Q8BR65 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Suds3Q8BR65 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Suds3Q8BR65 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Suds3Q8BR65 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Suds3Q8BR65 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Suds3Q8BR65 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Suds3Q8BR65 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Suds3Q8BR65 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Suds3Q8BR65 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.73■□□□□ 0.59
Suds3Q8BR65 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Suds3Q8BR65 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Suds3Q8BR65 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Suds3Q8BR65 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Suds3Q8BR65 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Suds3Q8BR65 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Suds3Q8BR65 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Suds3Q8BR65 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Suds3Q8BR65 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Suds3Q8BR65 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Suds3Q8BR65 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.72■□□□□ 0.59
Suds3Q8BR65 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Suds3Q8BR65 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Suds3Q8BR65 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Suds3Q8BR65 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Suds3Q8BR65 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Suds3Q8BR65 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Suds3Q8BR65 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Suds3Q8BR65 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Suds3Q8BR65 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Suds3Q8BR65 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Suds3Q8BR65 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Suds3Q8BR65 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Suds3Q8BR65 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Suds3Q8BR65 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.71■□□□□ 0.59
Suds3Q8BR65 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.71■□□□□ 0.59
Suds3Q8BR65 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Suds3Q8BR65 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Suds3Q8BR65 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Suds3Q8BR65 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Suds3Q8BR65 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Suds3Q8BR65 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.71■□□□□ 0.59
Suds3Q8BR65 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Suds3Q8BR65 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Suds3Q8BR65 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Suds3Q8BR65 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Suds3Q8BR65 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Suds3Q8BR65 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Suds3Q8BR65 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Suds3Q8BR65 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Suds3Q8BR65 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Suds3Q8BR65 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Suds3Q8BR65 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Suds3Q8BR65 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Suds3Q8BR65 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Suds3Q8BR65 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Suds3Q8BR65 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Suds3Q8BR65 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Suds3Q8BR65 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Suds3Q8BR65 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Suds3Q8BR65 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Suds3Q8BR65 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Suds3Q8BR65 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Suds3Q8BR65 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Suds3Q8BR65 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms