Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Sfr1Q8BP27 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sfr1Q8BP27 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sfr1Q8BP27 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sfr1Q8BP27 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sfr1Q8BP27 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sfr1Q8BP27 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sfr1Q8BP27 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Sfr1Q8BP27 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sfr1Q8BP27 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Sfr1Q8BP27 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Sfr1Q8BP27 Gm29257-201ENSMUST00000186115 639 ntBASIC18.58■□□□□ 0.56
Sfr1Q8BP27 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.58■□□□□ 0.56
Sfr1Q8BP27 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sfr1Q8BP27 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sfr1Q8BP27 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sfr1Q8BP27 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sfr1Q8BP27 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sfr1Q8BP27 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Sfr1Q8BP27 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sfr1Q8BP27 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sfr1Q8BP27 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sfr1Q8BP27 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Sfr1Q8BP27 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sfr1Q8BP27 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sfr1Q8BP27 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Sfr1Q8BP27 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Sfr1Q8BP27 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sfr1Q8BP27 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sfr1Q8BP27 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sfr1Q8BP27 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.57■□□□□ 0.56
Sfr1Q8BP27 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sfr1Q8BP27 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sfr1Q8BP27 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.57■□□□□ 0.56
Sfr1Q8BP27 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sfr1Q8BP27 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Sfr1Q8BP27 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sfr1Q8BP27 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.57■□□□□ 0.56
Sfr1Q8BP27 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.57■□□□□ 0.56
Sfr1Q8BP27 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.57■□□□□ 0.56
Sfr1Q8BP27 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sfr1Q8BP27 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Sfr1Q8BP27 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sfr1Q8BP27 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sfr1Q8BP27 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Sfr1Q8BP27 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.56■□□□□ 0.56
Sfr1Q8BP27 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sfr1Q8BP27 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sfr1Q8BP27 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sfr1Q8BP27 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sfr1Q8BP27 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.56■□□□□ 0.56
Sfr1Q8BP27 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Sfr1Q8BP27 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Sfr1Q8BP27 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Sfr1Q8BP27 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sfr1Q8BP27 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
Sfr1Q8BP27 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sfr1Q8BP27 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sfr1Q8BP27 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sfr1Q8BP27 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.55■□□□□ 0.56
Sfr1Q8BP27 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sfr1Q8BP27 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sfr1Q8BP27 Gm5408-201ENSMUST00000197998 747 ntBASIC18.55■□□□□ 0.56
Sfr1Q8BP27 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sfr1Q8BP27 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sfr1Q8BP27 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sfr1Q8BP27 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sfr1Q8BP27 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sfr1Q8BP27 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.55■□□□□ 0.56
Sfr1Q8BP27 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sfr1Q8BP27 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sfr1Q8BP27 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sfr1Q8BP27 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sfr1Q8BP27 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sfr1Q8BP27 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sfr1Q8BP27 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sfr1Q8BP27 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sfr1Q8BP27 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sfr1Q8BP27 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.54■□□□□ 0.56
Sfr1Q8BP27 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Sfr1Q8BP27 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Sfr1Q8BP27 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.54■□□□□ 0.56
Sfr1Q8BP27 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sfr1Q8BP27 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sfr1Q8BP27 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sfr1Q8BP27 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Sfr1Q8BP27 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.54■□□□□ 0.56
Sfr1Q8BP27 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sfr1Q8BP27 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sfr1Q8BP27 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sfr1Q8BP27 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sfr1Q8BP27 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.53■□□□□ 0.56
Sfr1Q8BP27 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.53■□□□□ 0.56
Sfr1Q8BP27 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sfr1Q8BP27 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Sfr1Q8BP27 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.53■□□□□ 0.56
Sfr1Q8BP27 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.53■□□□□ 0.56
Sfr1Q8BP27 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sfr1Q8BP27 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.53■□□□□ 0.56
Sfr1Q8BP27 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms