Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ckap4Q8BMK4 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ckap4Q8BMK4 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ckap4Q8BMK4 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ckap4Q8BMK4 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ckap4Q8BMK4 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Ckap4Q8BMK4 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ckap4Q8BMK4 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Ckap4Q8BMK4 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.34■□□□□ 0.37
Ckap4Q8BMK4 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.34■□□□□ 0.37
Ckap4Q8BMK4 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
Ckap4Q8BMK4 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ckap4Q8BMK4 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Ckap4Q8BMK4 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ckap4Q8BMK4 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ckap4Q8BMK4 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ckap4Q8BMK4 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ckap4Q8BMK4 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ckap4Q8BMK4 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ckap4Q8BMK4 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ckap4Q8BMK4 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ckap4Q8BMK4 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ckap4Q8BMK4 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ckap4Q8BMK4 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ckap4Q8BMK4 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ckap4Q8BMK4 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ckap4Q8BMK4 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ckap4Q8BMK4 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ckap4Q8BMK4 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.33■□□□□ 0.36
Ckap4Q8BMK4 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ckap4Q8BMK4 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Ckap4Q8BMK4 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ckap4Q8BMK4 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ckap4Q8BMK4 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ckap4Q8BMK4 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ckap4Q8BMK4 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ckap4Q8BMK4 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ckap4Q8BMK4 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ckap4Q8BMK4 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ckap4Q8BMK4 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ckap4Q8BMK4 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.32■□□□□ 0.36
Ckap4Q8BMK4 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ckap4Q8BMK4 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.32■□□□□ 0.36
Ckap4Q8BMK4 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ckap4Q8BMK4 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Ckap4Q8BMK4 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ckap4Q8BMK4 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ckap4Q8BMK4 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ckap4Q8BMK4 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Ckap4Q8BMK4 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.32■□□□□ 0.36
Ckap4Q8BMK4 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ckap4Q8BMK4 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ckap4Q8BMK4 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ckap4Q8BMK4 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ckap4Q8BMK4 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ckap4Q8BMK4 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Ckap4Q8BMK4 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ckap4Q8BMK4 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ckap4Q8BMK4 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ckap4Q8BMK4 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ckap4Q8BMK4 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Ckap4Q8BMK4 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ckap4Q8BMK4 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ckap4Q8BMK4 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Ckap4Q8BMK4 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ckap4Q8BMK4 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ckap4Q8BMK4 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ckap4Q8BMK4 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ckap4Q8BMK4 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.3■□□□□ 0.36
Ckap4Q8BMK4 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ckap4Q8BMK4 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Ckap4Q8BMK4 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Ckap4Q8BMK4 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ckap4Q8BMK4 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ckap4Q8BMK4 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ckap4Q8BMK4 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Ckap4Q8BMK4 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.3■□□□□ 0.36
Ckap4Q8BMK4 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.3■□□□□ 0.36
Ckap4Q8BMK4 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Ckap4Q8BMK4 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.3■□□□□ 0.36
Ckap4Q8BMK4 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Ckap4Q8BMK4 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ckap4Q8BMK4 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ckap4Q8BMK4 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ckap4Q8BMK4 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.3■□□□□ 0.36
Ckap4Q8BMK4 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ckap4Q8BMK4 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ckap4Q8BMK4 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ckap4Q8BMK4 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ckap4Q8BMK4 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ckap4Q8BMK4 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ckap4Q8BMK4 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Ckap4Q8BMK4 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ckap4Q8BMK4 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ckap4Q8BMK4 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ckap4Q8BMK4 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ckap4Q8BMK4 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ckap4Q8BMK4 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ckap4Q8BMK4 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ckap4Q8BMK4 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms