Protein–RNA interactions for Protein: Q8BLA8

Trpa1, Transient receptor potential cation channel subfamily A member 1, mousemouse

Predictions only

Length 1,125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpa1Q8BLA8 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trpa1Q8BLA8 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trpa1Q8BLA8 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Trpa1Q8BLA8 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trpa1Q8BLA8 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trpa1Q8BLA8 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trpa1Q8BLA8 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trpa1Q8BLA8 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trpa1Q8BLA8 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trpa1Q8BLA8 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trpa1Q8BLA8 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trpa1Q8BLA8 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trpa1Q8BLA8 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.2■□□□□ 0.66
Trpa1Q8BLA8 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
Trpa1Q8BLA8 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Trpa1Q8BLA8 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trpa1Q8BLA8 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trpa1Q8BLA8 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trpa1Q8BLA8 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
Trpa1Q8BLA8 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trpa1Q8BLA8 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Trpa1Q8BLA8 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trpa1Q8BLA8 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trpa1Q8BLA8 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trpa1Q8BLA8 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trpa1Q8BLA8 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trpa1Q8BLA8 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trpa1Q8BLA8 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.19■□□□□ 0.66
Trpa1Q8BLA8 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Trpa1Q8BLA8 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trpa1Q8BLA8 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Trpa1Q8BLA8 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.19■□□□□ 0.66
Trpa1Q8BLA8 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
Trpa1Q8BLA8 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trpa1Q8BLA8 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.19■□□□□ 0.66
Trpa1Q8BLA8 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.19■□□□□ 0.66
Trpa1Q8BLA8 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trpa1Q8BLA8 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Trpa1Q8BLA8 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Trpa1Q8BLA8 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Trpa1Q8BLA8 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.19■□□□□ 0.66
Trpa1Q8BLA8 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trpa1Q8BLA8 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Trpa1Q8BLA8 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.19■□□□□ 0.66
Trpa1Q8BLA8 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trpa1Q8BLA8 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Trpa1Q8BLA8 Gm6211-202ENSMUST00000167849 925 ntBASIC19.18■□□□□ 0.66
Trpa1Q8BLA8 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.18■□□□□ 0.66
Trpa1Q8BLA8 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trpa1Q8BLA8 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trpa1Q8BLA8 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trpa1Q8BLA8 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trpa1Q8BLA8 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC19.18■□□□□ 0.66
Trpa1Q8BLA8 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trpa1Q8BLA8 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trpa1Q8BLA8 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trpa1Q8BLA8 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trpa1Q8BLA8 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trpa1Q8BLA8 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trpa1Q8BLA8 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trpa1Q8BLA8 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Trpa1Q8BLA8 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Trpa1Q8BLA8 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trpa1Q8BLA8 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Trpa1Q8BLA8 Gm7290-201ENSMUST00000104990 617 ntBASIC19.17■□□□□ 0.66
Trpa1Q8BLA8 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.17■□□□□ 0.66
Trpa1Q8BLA8 Gm12918-201ENSMUST00000120234 636 ntBASIC19.17■□□□□ 0.66
Trpa1Q8BLA8 Gm15710-201ENSMUST00000121821 636 ntBASIC19.17■□□□□ 0.66
Trpa1Q8BLA8 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.17■□□□□ 0.66
Trpa1Q8BLA8 Gm5075-201ENSMUST00000196916 622 ntBASIC19.17■□□□□ 0.66
Trpa1Q8BLA8 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.17■□□□□ 0.66
Trpa1Q8BLA8 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.17■□□□□ 0.66
Trpa1Q8BLA8 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trpa1Q8BLA8 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trpa1Q8BLA8 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trpa1Q8BLA8 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Trpa1Q8BLA8 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trpa1Q8BLA8 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trpa1Q8BLA8 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trpa1Q8BLA8 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.16■□□□□ 0.66
Trpa1Q8BLA8 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trpa1Q8BLA8 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trpa1Q8BLA8 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trpa1Q8BLA8 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trpa1Q8BLA8 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.16■□□□□ 0.66
Trpa1Q8BLA8 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trpa1Q8BLA8 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.16■□□□□ 0.66
Trpa1Q8BLA8 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trpa1Q8BLA8 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trpa1Q8BLA8 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.16■□□□□ 0.66
Trpa1Q8BLA8 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.16■□□□□ 0.66
Trpa1Q8BLA8 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.16■□□□□ 0.66
Trpa1Q8BLA8 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.16■□□□□ 0.66
Trpa1Q8BLA8 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trpa1Q8BLA8 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trpa1Q8BLA8 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Trpa1Q8BLA8 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trpa1Q8BLA8 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trpa1Q8BLA8 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trpa1Q8BLA8 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms