Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.29■□□□□ 0.84
Tdp1Q8BJ37 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tdp1Q8BJ37 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tdp1Q8BJ37 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Tdp1Q8BJ37 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Tdp1Q8BJ37 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tdp1Q8BJ37 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tdp1Q8BJ37 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tdp1Q8BJ37 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tdp1Q8BJ37 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Tdp1Q8BJ37 Gm37292-201ENSMUST00000192062 758 ntBASIC20.28■□□□□ 0.84
Tdp1Q8BJ37 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.28■□□□□ 0.84
Tdp1Q8BJ37 Gm16042-201ENSMUST00000204813 1247 ntBASIC20.28■□□□□ 0.84
Tdp1Q8BJ37 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC20.28■□□□□ 0.84
Tdp1Q8BJ37 AC121577.1-201ENSMUST00000227302 707 ntBASIC20.28■□□□□ 0.84
Tdp1Q8BJ37 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Tdp1Q8BJ37 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tdp1Q8BJ37 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Tdp1Q8BJ37 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.28■□□□□ 0.84
Tdp1Q8BJ37 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tdp1Q8BJ37 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Tdp1Q8BJ37 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Tdp1Q8BJ37 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tdp1Q8BJ37 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Tdp1Q8BJ37 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC20.27■□□□□ 0.84
Tdp1Q8BJ37 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tdp1Q8BJ37 Gm21814-202ENSMUST00000203277 873 ntBASIC20.27■□□□□ 0.84
Tdp1Q8BJ37 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tdp1Q8BJ37 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tdp1Q8BJ37 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.27■□□□□ 0.83
Tdp1Q8BJ37 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.26■□□□□ 0.83
Tdp1Q8BJ37 Gm6433-201ENSMUST00000118634 875 ntBASIC20.26■□□□□ 0.83
Tdp1Q8BJ37 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tdp1Q8BJ37 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tdp1Q8BJ37 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.26■□□□□ 0.83
Tdp1Q8BJ37 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC20.26■□□□□ 0.83
Tdp1Q8BJ37 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tdp1Q8BJ37 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tdp1Q8BJ37 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Tdp1Q8BJ37 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Tdp1Q8BJ37 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tdp1Q8BJ37 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
Tdp1Q8BJ37 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tdp1Q8BJ37 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tdp1Q8BJ37 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tdp1Q8BJ37 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tdp1Q8BJ37 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tdp1Q8BJ37 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tdp1Q8BJ37 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tdp1Q8BJ37 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.25■□□□□ 0.83
Tdp1Q8BJ37 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tdp1Q8BJ37 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tdp1Q8BJ37 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tdp1Q8BJ37 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Tdp1Q8BJ37 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tdp1Q8BJ37 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tdp1Q8BJ37 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tdp1Q8BJ37 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tdp1Q8BJ37 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Tdp1Q8BJ37 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tdp1Q8BJ37 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tdp1Q8BJ37 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Tdp1Q8BJ37 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Tdp1Q8BJ37 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.24■□□□□ 0.83
Tdp1Q8BJ37 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tdp1Q8BJ37 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Tdp1Q8BJ37 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC20.24■□□□□ 0.83
Tdp1Q8BJ37 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tdp1Q8BJ37 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Tdp1Q8BJ37 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Tdp1Q8BJ37 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tdp1Q8BJ37 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC20.23■□□□□ 0.83
Tdp1Q8BJ37 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tdp1Q8BJ37 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Tdp1Q8BJ37 Gm10231-201ENSMUST00000181584 441 ntBASIC20.23■□□□□ 0.83
Tdp1Q8BJ37 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tdp1Q8BJ37 Gm10175-202ENSMUST00000208752 441 ntBASIC20.23■□□□□ 0.83
Tdp1Q8BJ37 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.23■□□□□ 0.83
Tdp1Q8BJ37 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tdp1Q8BJ37 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tdp1Q8BJ37 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tdp1Q8BJ37 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tdp1Q8BJ37 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Tdp1Q8BJ37 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tdp1Q8BJ37 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tdp1Q8BJ37 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
Tdp1Q8BJ37 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.22■□□□□ 0.83
Tdp1Q8BJ37 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tdp1Q8BJ37 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tdp1Q8BJ37 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tdp1Q8BJ37 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tdp1Q8BJ37 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.22■□□□□ 0.83
Tdp1Q8BJ37 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tdp1Q8BJ37 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Tdp1Q8BJ37 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Tdp1Q8BJ37 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tdp1Q8BJ37 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Tdp1Q8BJ37 Gm30025-201ENSMUST00000218555 728 ntBASIC20.21■□□□□ 0.83
Tdp1Q8BJ37 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tdp1Q8BJ37 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms