Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc40Q8BI79 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Ccdc40Q8BI79 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc40Q8BI79 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc40Q8BI79 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc40Q8BI79 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc40Q8BI79 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc40Q8BI79 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc40Q8BI79 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Ccdc40Q8BI79 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc40Q8BI79 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.06■□□□□ 0.64
Ccdc40Q8BI79 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.06■□□□□ 0.64
Ccdc40Q8BI79 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.06■□□□□ 0.64
Ccdc40Q8BI79 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.06■□□□□ 0.64
Ccdc40Q8BI79 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.06■□□□□ 0.64
Ccdc40Q8BI79 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Ccdc40Q8BI79 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc40Q8BI79 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc40Q8BI79 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc40Q8BI79 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
Ccdc40Q8BI79 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc40Q8BI79 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.05■□□□□ 0.64
Ccdc40Q8BI79 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc40Q8BI79 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc40Q8BI79 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc40Q8BI79 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc40Q8BI79 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc40Q8BI79 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc40Q8BI79 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc40Q8BI79 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc40Q8BI79 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc40Q8BI79 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc40Q8BI79 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.05■□□□□ 0.64
Ccdc40Q8BI79 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Ccdc40Q8BI79 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc40Q8BI79 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc40Q8BI79 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.05■□□□□ 0.64
Ccdc40Q8BI79 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Ccdc40Q8BI79 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc40Q8BI79 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc40Q8BI79 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc40Q8BI79 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.04■□□□□ 0.64
Ccdc40Q8BI79 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Ccdc40Q8BI79 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc40Q8BI79 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Ccdc40Q8BI79 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc40Q8BI79 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc40Q8BI79 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc40Q8BI79 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc40Q8BI79 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.03■□□□□ 0.64
Ccdc40Q8BI79 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc40Q8BI79 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc40Q8BI79 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
Ccdc40Q8BI79 Gm42778-201ENSMUST00000199644 553 ntBASIC19.03■□□□□ 0.64
Ccdc40Q8BI79 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc40Q8BI79 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc40Q8BI79 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc40Q8BI79 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc40Q8BI79 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.03■□□□□ 0.64
Ccdc40Q8BI79 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc40Q8BI79 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc40Q8BI79 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.02■□□□□ 0.64
Ccdc40Q8BI79 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc40Q8BI79 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc40Q8BI79 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc40Q8BI79 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc40Q8BI79 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc40Q8BI79 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc40Q8BI79 Gm13534-201ENSMUST00000121169 513 ntBASIC19.02■□□□□ 0.64
Ccdc40Q8BI79 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc40Q8BI79 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc40Q8BI79 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Ccdc40Q8BI79 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc40Q8BI79 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc40Q8BI79 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc40Q8BI79 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc40Q8BI79 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Ccdc40Q8BI79 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc40Q8BI79 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc40Q8BI79 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc40Q8BI79 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc40Q8BI79 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc40Q8BI79 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc40Q8BI79 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Ccdc40Q8BI79 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc40Q8BI79 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc40Q8BI79 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc40Q8BI79 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc40Q8BI79 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
Ccdc40Q8BI79 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc40Q8BI79 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc40Q8BI79 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.01■□□□□ 0.63
Ccdc40Q8BI79 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc40Q8BI79 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.01■□□□□ 0.63
Ccdc40Q8BI79 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc40Q8BI79 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc40Q8BI79 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc40Q8BI79 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc40Q8BI79 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc40Q8BI79 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms