Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
Clrn3Q8BHH8 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Clrn3Q8BHH8 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Clrn3Q8BHH8 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Clrn3Q8BHH8 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clrn3Q8BHH8 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Clrn3Q8BHH8 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
Clrn3Q8BHH8 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.16■□□□□ 0.34
Clrn3Q8BHH8 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clrn3Q8BHH8 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Clrn3Q8BHH8 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Clrn3Q8BHH8 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Clrn3Q8BHH8 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.16■□□□□ 0.34
Clrn3Q8BHH8 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clrn3Q8BHH8 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clrn3Q8BHH8 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.16■□□□□ 0.34
Clrn3Q8BHH8 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clrn3Q8BHH8 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clrn3Q8BHH8 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clrn3Q8BHH8 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clrn3Q8BHH8 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Clrn3Q8BHH8 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Clrn3Q8BHH8 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.15■□□□□ 0.34
Clrn3Q8BHH8 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Clrn3Q8BHH8 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clrn3Q8BHH8 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.15■□□□□ 0.34
Clrn3Q8BHH8 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clrn3Q8BHH8 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clrn3Q8BHH8 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Clrn3Q8BHH8 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
Clrn3Q8BHH8 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Clrn3Q8BHH8 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clrn3Q8BHH8 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clrn3Q8BHH8 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clrn3Q8BHH8 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Clrn3Q8BHH8 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clrn3Q8BHH8 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clrn3Q8BHH8 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clrn3Q8BHH8 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Clrn3Q8BHH8 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
Clrn3Q8BHH8 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clrn3Q8BHH8 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.14■□□□□ 0.33
Clrn3Q8BHH8 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.14■□□□□ 0.33
Clrn3Q8BHH8 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Clrn3Q8BHH8 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Clrn3Q8BHH8 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clrn3Q8BHH8 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clrn3Q8BHH8 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clrn3Q8BHH8 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clrn3Q8BHH8 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clrn3Q8BHH8 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Clrn3Q8BHH8 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Clrn3Q8BHH8 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clrn3Q8BHH8 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.13■□□□□ 0.33
Clrn3Q8BHH8 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.13■□□□□ 0.33
Clrn3Q8BHH8 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.13■□□□□ 0.33
Clrn3Q8BHH8 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clrn3Q8BHH8 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clrn3Q8BHH8 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Clrn3Q8BHH8 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.13■□□□□ 0.33
Clrn3Q8BHH8 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clrn3Q8BHH8 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clrn3Q8BHH8 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clrn3Q8BHH8 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Clrn3Q8BHH8 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Clrn3Q8BHH8 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Clrn3Q8BHH8 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clrn3Q8BHH8 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clrn3Q8BHH8 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clrn3Q8BHH8 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clrn3Q8BHH8 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Clrn3Q8BHH8 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.12■□□□□ 0.33
Clrn3Q8BHH8 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Clrn3Q8BHH8 Gm42569-201ENSMUST00000200539 472 ntBASIC17.12■□□□□ 0.33
Clrn3Q8BHH8 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.12■□□□□ 0.33
Clrn3Q8BHH8 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Clrn3Q8BHH8 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clrn3Q8BHH8 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clrn3Q8BHH8 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clrn3Q8BHH8 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Clrn3Q8BHH8 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Clrn3Q8BHH8 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Clrn3Q8BHH8 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clrn3Q8BHH8 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clrn3Q8BHH8 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clrn3Q8BHH8 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clrn3Q8BHH8 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clrn3Q8BHH8 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clrn3Q8BHH8 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.11■□□□□ 0.33
Clrn3Q8BHH8 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Clrn3Q8BHH8 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.11■□□□□ 0.33
Clrn3Q8BHH8 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clrn3Q8BHH8 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.11■□□□□ 0.33
Clrn3Q8BHH8 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clrn3Q8BHH8 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Clrn3Q8BHH8 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.11■□□□□ 0.33
Clrn3Q8BHH8 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clrn3Q8BHH8 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clrn3Q8BHH8 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clrn3Q8BHH8 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms