Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atg4bQ8BGE6 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atg4bQ8BGE6 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.26■□□□□ 0.35
Atg4bQ8BGE6 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atg4bQ8BGE6 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Atg4bQ8BGE6 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atg4bQ8BGE6 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.26■□□□□ 0.35
Atg4bQ8BGE6 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.26■□□□□ 0.35
Atg4bQ8BGE6 Gm6211-202ENSMUST00000167849 925 ntBASIC17.26■□□□□ 0.35
Atg4bQ8BGE6 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Atg4bQ8BGE6 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.26■□□□□ 0.35
Atg4bQ8BGE6 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atg4bQ8BGE6 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.26■□□□□ 0.35
Atg4bQ8BGE6 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Atg4bQ8BGE6 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atg4bQ8BGE6 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Atg4bQ8BGE6 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atg4bQ8BGE6 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atg4bQ8BGE6 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atg4bQ8BGE6 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atg4bQ8BGE6 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Atg4bQ8BGE6 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Atg4bQ8BGE6 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Atg4bQ8BGE6 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.25■□□□□ 0.35
Atg4bQ8BGE6 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.25■□□□□ 0.35
Atg4bQ8BGE6 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atg4bQ8BGE6 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Atg4bQ8BGE6 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.25■□□□□ 0.35
Atg4bQ8BGE6 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atg4bQ8BGE6 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.25■□□□□ 0.35
Atg4bQ8BGE6 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atg4bQ8BGE6 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atg4bQ8BGE6 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atg4bQ8BGE6 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atg4bQ8BGE6 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Atg4bQ8BGE6 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Atg4bQ8BGE6 Gm13148-201ENSMUST00000118892 745 ntBASIC17.24■□□□□ 0.35
Atg4bQ8BGE6 Mir5133-201ENSMUST00000174955 77 ntBASIC17.24■□□□□ 0.35
Atg4bQ8BGE6 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atg4bQ8BGE6 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Atg4bQ8BGE6 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atg4bQ8BGE6 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Atg4bQ8BGE6 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Atg4bQ8BGE6 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atg4bQ8BGE6 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atg4bQ8BGE6 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atg4bQ8BGE6 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atg4bQ8BGE6 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atg4bQ8BGE6 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Atg4bQ8BGE6 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.23■□□□□ 0.35
Atg4bQ8BGE6 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.23■□□□□ 0.35
Atg4bQ8BGE6 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atg4bQ8BGE6 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.23■□□□□ 0.35
Atg4bQ8BGE6 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atg4bQ8BGE6 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Atg4bQ8BGE6 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.22■□□□□ 0.35
Atg4bQ8BGE6 Gm12933-201ENSMUST00000120203 872 ntBASIC17.22■□□□□ 0.35
Atg4bQ8BGE6 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Atg4bQ8BGE6 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atg4bQ8BGE6 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atg4bQ8BGE6 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atg4bQ8BGE6 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Atg4bQ8BGE6 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Atg4bQ8BGE6 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.22■□□□□ 0.35
Atg4bQ8BGE6 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Atg4bQ8BGE6 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atg4bQ8BGE6 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atg4bQ8BGE6 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Atg4bQ8BGE6 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atg4bQ8BGE6 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atg4bQ8BGE6 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atg4bQ8BGE6 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atg4bQ8BGE6 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atg4bQ8BGE6 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.21■□□□□ 0.35
Atg4bQ8BGE6 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atg4bQ8BGE6 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Atg4bQ8BGE6 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.21■□□□□ 0.35
Atg4bQ8BGE6 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.21■□□□□ 0.34
Atg4bQ8BGE6 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Atg4bQ8BGE6 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Atg4bQ8BGE6 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Atg4bQ8BGE6 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atg4bQ8BGE6 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atg4bQ8BGE6 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Atg4bQ8BGE6 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.2■□□□□ 0.34
Atg4bQ8BGE6 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Atg4bQ8BGE6 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atg4bQ8BGE6 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atg4bQ8BGE6 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atg4bQ8BGE6 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atg4bQ8BGE6 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Atg4bQ8BGE6 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Atg4bQ8BGE6 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atg4bQ8BGE6 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atg4bQ8BGE6 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Atg4bQ8BGE6 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atg4bQ8BGE6 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.19■□□□□ 0.34
Atg4bQ8BGE6 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Atg4bQ8BGE6 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atg4bQ8BGE6 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms