Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.89■□□□□ 0.45
Trim50Q810I2 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim50Q810I2 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim50Q810I2 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim50Q810I2 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim50Q810I2 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim50Q810I2 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim50Q810I2 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim50Q810I2 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim50Q810I2 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim50Q810I2 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.88■□□□□ 0.45
Trim50Q810I2 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim50Q810I2 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.88■□□□□ 0.45
Trim50Q810I2 Gm7291-201ENSMUST00000199147 382 ntBASIC17.88■□□□□ 0.45
Trim50Q810I2 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
Trim50Q810I2 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
Trim50Q810I2 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim50Q810I2 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim50Q810I2 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim50Q810I2 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Trim50Q810I2 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Trim50Q810I2 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim50Q810I2 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim50Q810I2 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Trim50Q810I2 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim50Q810I2 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Trim50Q810I2 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim50Q810I2 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim50Q810I2 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim50Q810I2 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim50Q810I2 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim50Q810I2 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Trim50Q810I2 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim50Q810I2 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.86■□□□□ 0.45
Trim50Q810I2 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.86■□□□□ 0.45
Trim50Q810I2 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim50Q810I2 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.86■□□□□ 0.45
Trim50Q810I2 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim50Q810I2 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.86■□□□□ 0.45
Trim50Q810I2 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim50Q810I2 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim50Q810I2 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Trim50Q810I2 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim50Q810I2 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.85■□□□□ 0.45
Trim50Q810I2 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.85■□□□□ 0.45
Trim50Q810I2 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.85■□□□□ 0.45
Trim50Q810I2 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim50Q810I2 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Trim50Q810I2 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Trim50Q810I2 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim50Q810I2 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim50Q810I2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim50Q810I2 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim50Q810I2 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim50Q810I2 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim50Q810I2 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Trim50Q810I2 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Trim50Q810I2 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim50Q810I2 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim50Q810I2 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim50Q810I2 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim50Q810I2 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.84■□□□□ 0.45
Trim50Q810I2 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim50Q810I2 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
Trim50Q810I2 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.84■□□□□ 0.45
Trim50Q810I2 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim50Q810I2 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim50Q810I2 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim50Q810I2 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim50Q810I2 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Trim50Q810I2 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim50Q810I2 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim50Q810I2 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim50Q810I2 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Trim50Q810I2 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.83■□□□□ 0.44
Trim50Q810I2 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.83■□□□□ 0.44
Trim50Q810I2 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.83■□□□□ 0.44
Trim50Q810I2 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.83■□□□□ 0.44
Trim50Q810I2 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim50Q810I2 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trim50Q810I2 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim50Q810I2 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim50Q810I2 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim50Q810I2 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.82■□□□□ 0.44
Trim50Q810I2 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim50Q810I2 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim50Q810I2 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.82■□□□□ 0.44
Trim50Q810I2 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Trim50Q810I2 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.82■□□□□ 0.44
Trim50Q810I2 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trim50Q810I2 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.82■□□□□ 0.44
Trim50Q810I2 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.82■□□□□ 0.44
Trim50Q810I2 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim50Q810I2 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim50Q810I2 Gm6365-201ENSMUST00000054711 744 ntBASIC17.82■□□□□ 0.44
Trim50Q810I2 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim50Q810I2 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Trim50Q810I2 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim50Q810I2 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim50Q810I2 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms