Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Otop1Q80VM9 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Otop1Q80VM9 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Otop1Q80VM9 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Otop1Q80VM9 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Otop1Q80VM9 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Otop1Q80VM9 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Otop1Q80VM9 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Otop1Q80VM9 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Otop1Q80VM9 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Otop1Q80VM9 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Otop1Q80VM9 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Otop1Q80VM9 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Otop1Q80VM9 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Otop1Q80VM9 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.56■□□□□ 0.4
Otop1Q80VM9 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.56■□□□□ 0.4
Otop1Q80VM9 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Otop1Q80VM9 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.56■□□□□ 0.4
Otop1Q80VM9 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Otop1Q80VM9 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Otop1Q80VM9 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Otop1Q80VM9 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Otop1Q80VM9 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.56■□□□□ 0.4
Otop1Q80VM9 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Otop1Q80VM9 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.56■□□□□ 0.4
Otop1Q80VM9 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Otop1Q80VM9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Otop1Q80VM9 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Otop1Q80VM9 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Otop1Q80VM9 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Otop1Q80VM9 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Otop1Q80VM9 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Otop1Q80VM9 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.55■□□□□ 0.4
Otop1Q80VM9 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Otop1Q80VM9 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Otop1Q80VM9 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Otop1Q80VM9 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Otop1Q80VM9 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Otop1Q80VM9 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Otop1Q80VM9 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Otop1Q80VM9 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Otop1Q80VM9 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Otop1Q80VM9 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Otop1Q80VM9 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Otop1Q80VM9 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Otop1Q80VM9 Flg-201ENSMUST00000050758 1488 ntBASIC17.55■□□□□ 0.4
Otop1Q80VM9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Otop1Q80VM9 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Otop1Q80VM9 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Otop1Q80VM9 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Otop1Q80VM9 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Otop1Q80VM9 Gm11927-201ENSMUST00000118472 759 ntBASIC17.54■□□□□ 0.4
Otop1Q80VM9 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Otop1Q80VM9 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Otop1Q80VM9 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Otop1Q80VM9 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Otop1Q80VM9 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Otop1Q80VM9 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Otop1Q80VM9 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Otop1Q80VM9 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Otop1Q80VM9 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Otop1Q80VM9 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Otop1Q80VM9 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.53■□□□□ 0.4
Otop1Q80VM9 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Otop1Q80VM9 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.53■□□□□ 0.4
Otop1Q80VM9 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.53■□□□□ 0.4
Otop1Q80VM9 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Otop1Q80VM9 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Otop1Q80VM9 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Otop1Q80VM9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Otop1Q80VM9 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Otop1Q80VM9 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Otop1Q80VM9 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Otop1Q80VM9 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Otop1Q80VM9 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Otop1Q80VM9 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Otop1Q80VM9 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Otop1Q80VM9 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Otop1Q80VM9 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.52■□□□□ 0.4
Otop1Q80VM9 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Otop1Q80VM9 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Otop1Q80VM9 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Otop1Q80VM9 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Otop1Q80VM9 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Otop1Q80VM9 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Otop1Q80VM9 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Otop1Q80VM9 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Otop1Q80VM9 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Otop1Q80VM9 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Otop1Q80VM9 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Otop1Q80VM9 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Otop1Q80VM9 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Otop1Q80VM9 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Otop1Q80VM9 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Otop1Q80VM9 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Otop1Q80VM9 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Otop1Q80VM9 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Otop1Q80VM9 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.51■□□□□ 0.39
Otop1Q80VM9 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.51■□□□□ 0.39
Otop1Q80VM9 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms