Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Pcdh19Q80TF3 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh19Q80TF3 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh19Q80TF3 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh19Q80TF3 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh19Q80TF3 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh19Q80TF3 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.99■□□□□ 0.47
Pcdh19Q80TF3 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh19Q80TF3 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh19Q80TF3 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh19Q80TF3 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh19Q80TF3 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.99■□□□□ 0.47
Pcdh19Q80TF3 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh19Q80TF3 Gm18666-201ENSMUST00000190039 958 ntBASIC17.99■□□□□ 0.47
Pcdh19Q80TF3 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh19Q80TF3 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh19Q80TF3 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh19Q80TF3 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh19Q80TF3 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh19Q80TF3 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh19Q80TF3 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh19Q80TF3 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Pcdh19Q80TF3 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh19Q80TF3 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Pcdh19Q80TF3 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh19Q80TF3 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.98■□□□□ 0.47
Pcdh19Q80TF3 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.98■□□□□ 0.47
Pcdh19Q80TF3 Gm22325-201ENSMUST00000158904 308 ntBASIC17.98■□□□□ 0.47
Pcdh19Q80TF3 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.98■□□□□ 0.47
Pcdh19Q80TF3 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
Pcdh19Q80TF3 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh19Q80TF3 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh19Q80TF3 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh19Q80TF3 Flg-201ENSMUST00000050758 1488 ntBASIC17.98■□□□□ 0.47
Pcdh19Q80TF3 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Pcdh19Q80TF3 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh19Q80TF3 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh19Q80TF3 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Pcdh19Q80TF3 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.97■□□□□ 0.47
Pcdh19Q80TF3 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdh19Q80TF3 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdh19Q80TF3 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Pcdh19Q80TF3 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.97■□□□□ 0.47
Pcdh19Q80TF3 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.97■□□□□ 0.47
Pcdh19Q80TF3 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdh19Q80TF3 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdh19Q80TF3 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdh19Q80TF3 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.97■□□□□ 0.47
Pcdh19Q80TF3 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh19Q80TF3 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh19Q80TF3 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh19Q80TF3 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Pcdh19Q80TF3 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.96■□□□□ 0.47
Pcdh19Q80TF3 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh19Q80TF3 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh19Q80TF3 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.96■□□□□ 0.47
Pcdh19Q80TF3 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Pcdh19Q80TF3 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.96■□□□□ 0.47
Pcdh19Q80TF3 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh19Q80TF3 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh19Q80TF3 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh19Q80TF3 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh19Q80TF3 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh19Q80TF3 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh19Q80TF3 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Pcdh19Q80TF3 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdh19Q80TF3 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdh19Q80TF3 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdh19Q80TF3 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdh19Q80TF3 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Pcdh19Q80TF3 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Pcdh19Q80TF3 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdh19Q80TF3 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdh19Q80TF3 Gm11249-201ENSMUST00000117071 859 ntBASIC17.95■□□□□ 0.46
Pcdh19Q80TF3 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdh19Q80TF3 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdh19Q80TF3 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
Pcdh19Q80TF3 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdh19Q80TF3 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh19Q80TF3 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Pcdh19Q80TF3 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh19Q80TF3 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh19Q80TF3 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh19Q80TF3 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh19Q80TF3 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Pcdh19Q80TF3 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh19Q80TF3 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh19Q80TF3 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh19Q80TF3 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh19Q80TF3 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh19Q80TF3 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh19Q80TF3 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh19Q80TF3 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh19Q80TF3 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh19Q80TF3 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh19Q80TF3 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh19Q80TF3 Gm5643-201ENSMUST00000117081 966 ntBASIC17.93■□□□□ 0.46
Pcdh19Q80TF3 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh19Q80TF3 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.93■□□□□ 0.46
Pcdh19Q80TF3 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms