Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf38bQ80SY5 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf38bQ80SY5 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf38bQ80SY5 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf38bQ80SY5 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf38bQ80SY5 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf38bQ80SY5 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf38bQ80SY5 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.1■□□□□ 0.65
Prpf38bQ80SY5 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf38bQ80SY5 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf38bQ80SY5 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf38bQ80SY5 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf38bQ80SY5 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf38bQ80SY5 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf38bQ80SY5 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf38bQ80SY5 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
Prpf38bQ80SY5 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Prpf38bQ80SY5 Dio3-201ENSMUST00000097228 1449 ntBASIC19.09■□□□□ 0.65
Prpf38bQ80SY5 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf38bQ80SY5 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Prpf38bQ80SY5 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf38bQ80SY5 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Prpf38bQ80SY5 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf38bQ80SY5 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf38bQ80SY5 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf38bQ80SY5 Gm15378-201ENSMUST00000121894 207 ntBASIC19.09■□□□□ 0.65
Prpf38bQ80SY5 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf38bQ80SY5 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
Prpf38bQ80SY5 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf38bQ80SY5 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf38bQ80SY5 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf38bQ80SY5 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf38bQ80SY5 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf38bQ80SY5 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf38bQ80SY5 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.08■□□□□ 0.65
Prpf38bQ80SY5 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.08■□□□□ 0.65
Prpf38bQ80SY5 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.08■□□□□ 0.65
Prpf38bQ80SY5 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Prpf38bQ80SY5 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Prpf38bQ80SY5 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Prpf38bQ80SY5 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Prpf38bQ80SY5 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Prpf38bQ80SY5 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC19.08■□□□□ 0.64
Prpf38bQ80SY5 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
Prpf38bQ80SY5 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Prpf38bQ80SY5 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Prpf38bQ80SY5 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Prpf38bQ80SY5 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.08■□□□□ 0.64
Prpf38bQ80SY5 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Prpf38bQ80SY5 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Prpf38bQ80SY5 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Prpf38bQ80SY5 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Prpf38bQ80SY5 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf38bQ80SY5 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf38bQ80SY5 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Prpf38bQ80SY5 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf38bQ80SY5 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf38bQ80SY5 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.07■□□□□ 0.64
Prpf38bQ80SY5 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.07■□□□□ 0.64
Prpf38bQ80SY5 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.07■□□□□ 0.64
Prpf38bQ80SY5 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf38bQ80SY5 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf38bQ80SY5 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf38bQ80SY5 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Prpf38bQ80SY5 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.07■□□□□ 0.64
Prpf38bQ80SY5 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.07■□□□□ 0.64
Prpf38bQ80SY5 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf38bQ80SY5 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.06■□□□□ 0.64
Prpf38bQ80SY5 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Prpf38bQ80SY5 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prpf38bQ80SY5 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prpf38bQ80SY5 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prpf38bQ80SY5 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.06■□□□□ 0.64
Prpf38bQ80SY5 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.06■□□□□ 0.64
Prpf38bQ80SY5 Gm10698-201ENSMUST00000182663 604 ntBASIC19.06■□□□□ 0.64
Prpf38bQ80SY5 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Prpf38bQ80SY5 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Prpf38bQ80SY5 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Prpf38bQ80SY5 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prpf38bQ80SY5 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Prpf38bQ80SY5 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prpf38bQ80SY5 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.05■□□□□ 0.64
Prpf38bQ80SY5 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prpf38bQ80SY5 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prpf38bQ80SY5 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Prpf38bQ80SY5 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Prpf38bQ80SY5 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prpf38bQ80SY5 Gm7367-201ENSMUST00000057611 492 ntBASIC19.05■□□□□ 0.64
Prpf38bQ80SY5 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
Prpf38bQ80SY5 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prpf38bQ80SY5 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prpf38bQ80SY5 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prpf38bQ80SY5 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prpf38bQ80SY5 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf38bQ80SY5 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
Prpf38bQ80SY5 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf38bQ80SY5 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf38bQ80SY5 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.04■□□□□ 0.64
Prpf38bQ80SY5 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC19.04■□□□□ 0.64
Prpf38bQ80SY5 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms