Protein–RNA interactions for Protein: Q7TQK4

Exosc3, Exosome complex component RRP40, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Exosc3Q7TQK4 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Exosc3Q7TQK4 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Exosc3Q7TQK4 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.86■□□□□ 0.29
Exosc3Q7TQK4 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Exosc3Q7TQK4 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Exosc3Q7TQK4 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Exosc3Q7TQK4 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Exosc3Q7TQK4 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Exosc3Q7TQK4 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Exosc3Q7TQK4 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.85■□□□□ 0.29
Exosc3Q7TQK4 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.85■□□□□ 0.29
Exosc3Q7TQK4 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Exosc3Q7TQK4 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Exosc3Q7TQK4 Gm5408-201ENSMUST00000197998 747 ntBASIC16.85■□□□□ 0.29
Exosc3Q7TQK4 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Exosc3Q7TQK4 Rab3c-203ENSMUST00000224180 967 ntBASIC16.85■□□□□ 0.29
Exosc3Q7TQK4 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Exosc3Q7TQK4 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Exosc3Q7TQK4 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Exosc3Q7TQK4 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Exosc3Q7TQK4 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Exosc3Q7TQK4 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Exosc3Q7TQK4 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Exosc3Q7TQK4 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.84■□□□□ 0.29
Exosc3Q7TQK4 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.84■□□□□ 0.29
Exosc3Q7TQK4 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Exosc3Q7TQK4 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Exosc3Q7TQK4 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Exosc3Q7TQK4 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Exosc3Q7TQK4 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Exosc3Q7TQK4 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Exosc3Q7TQK4 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.84■□□□□ 0.29
Exosc3Q7TQK4 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Exosc3Q7TQK4 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.84■□□□□ 0.29
Exosc3Q7TQK4 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Exosc3Q7TQK4 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Exosc3Q7TQK4 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Exosc3Q7TQK4 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.83■□□□□ 0.28
Exosc3Q7TQK4 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.83■□□□□ 0.28
Exosc3Q7TQK4 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.83■□□□□ 0.28
Exosc3Q7TQK4 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Exosc3Q7TQK4 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Exosc3Q7TQK4 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Exosc3Q7TQK4 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Exosc3Q7TQK4 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.83■□□□□ 0.28
Exosc3Q7TQK4 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Exosc3Q7TQK4 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.83■□□□□ 0.28
Exosc3Q7TQK4 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Exosc3Q7TQK4 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Exosc3Q7TQK4 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Exosc3Q7TQK4 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Exosc3Q7TQK4 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Exosc3Q7TQK4 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Exosc3Q7TQK4 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.82■□□□□ 0.28
Exosc3Q7TQK4 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.82■□□□□ 0.28
Exosc3Q7TQK4 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Exosc3Q7TQK4 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Exosc3Q7TQK4 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Exosc3Q7TQK4 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.82■□□□□ 0.28
Exosc3Q7TQK4 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.82■□□□□ 0.28
Exosc3Q7TQK4 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Exosc3Q7TQK4 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Exosc3Q7TQK4 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Exosc3Q7TQK4 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Exosc3Q7TQK4 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Exosc3Q7TQK4 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Exosc3Q7TQK4 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Exosc3Q7TQK4 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Exosc3Q7TQK4 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Exosc3Q7TQK4 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Exosc3Q7TQK4 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Exosc3Q7TQK4 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Exosc3Q7TQK4 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Exosc3Q7TQK4 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Exosc3Q7TQK4 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Exosc3Q7TQK4 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.81■□□□□ 0.28
Exosc3Q7TQK4 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Exosc3Q7TQK4 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Exosc3Q7TQK4 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Exosc3Q7TQK4 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Exosc3Q7TQK4 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Exosc3Q7TQK4 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Exosc3Q7TQK4 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Exosc3Q7TQK4 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Exosc3Q7TQK4 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Exosc3Q7TQK4 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.8■□□□□ 0.28
Exosc3Q7TQK4 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Exosc3Q7TQK4 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.8■□□□□ 0.28
Exosc3Q7TQK4 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.8■□□□□ 0.28
Exosc3Q7TQK4 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.8■□□□□ 0.28
Exosc3Q7TQK4 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.8■□□□□ 0.28
Exosc3Q7TQK4 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Exosc3Q7TQK4 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Exosc3Q7TQK4 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Exosc3Q7TQK4 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Exosc3Q7TQK4 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.8■□□□□ 0.28
Exosc3Q7TQK4 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Exosc3Q7TQK4 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Exosc3Q7TQK4 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Exosc3Q7TQK4 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms