Protein–RNA interactions for Protein: Q78WZ7

Twistnb, DNA-directed RNA polymerase I subunit RPA43, mousemouse

Known RBP Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TwistnbQ78WZ7 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TwistnbQ78WZ7 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TwistnbQ78WZ7 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
TwistnbQ78WZ7 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TwistnbQ78WZ7 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
TwistnbQ78WZ7 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TwistnbQ78WZ7 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TwistnbQ78WZ7 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TwistnbQ78WZ7 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
TwistnbQ78WZ7 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TwistnbQ78WZ7 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TwistnbQ78WZ7 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TwistnbQ78WZ7 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TwistnbQ78WZ7 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TwistnbQ78WZ7 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TwistnbQ78WZ7 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TwistnbQ78WZ7 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TwistnbQ78WZ7 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TwistnbQ78WZ7 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TwistnbQ78WZ7 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TwistnbQ78WZ7 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TwistnbQ78WZ7 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.68■□□□□ 0.58
TwistnbQ78WZ7 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.68■□□□□ 0.58
TwistnbQ78WZ7 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TwistnbQ78WZ7 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TwistnbQ78WZ7 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TwistnbQ78WZ7 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TwistnbQ78WZ7 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TwistnbQ78WZ7 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TwistnbQ78WZ7 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TwistnbQ78WZ7 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TwistnbQ78WZ7 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.67■□□□□ 0.58
TwistnbQ78WZ7 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TwistnbQ78WZ7 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TwistnbQ78WZ7 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.67■□□□□ 0.58
TwistnbQ78WZ7 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.67■□□□□ 0.58
TwistnbQ78WZ7 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TwistnbQ78WZ7 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
TwistnbQ78WZ7 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.67■□□□□ 0.58
TwistnbQ78WZ7 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TwistnbQ78WZ7 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
TwistnbQ78WZ7 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TwistnbQ78WZ7 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TwistnbQ78WZ7 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TwistnbQ78WZ7 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TwistnbQ78WZ7 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TwistnbQ78WZ7 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TwistnbQ78WZ7 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
TwistnbQ78WZ7 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TwistnbQ78WZ7 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.66■□□□□ 0.58
TwistnbQ78WZ7 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.66■□□□□ 0.58
TwistnbQ78WZ7 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TwistnbQ78WZ7 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TwistnbQ78WZ7 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.65■□□□□ 0.58
TwistnbQ78WZ7 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TwistnbQ78WZ7 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TwistnbQ78WZ7 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TwistnbQ78WZ7 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TwistnbQ78WZ7 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.65■□□□□ 0.58
TwistnbQ78WZ7 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TwistnbQ78WZ7 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TwistnbQ78WZ7 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.65■□□□□ 0.58
TwistnbQ78WZ7 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TwistnbQ78WZ7 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TwistnbQ78WZ7 Gm7860-201ENSMUST00000121190 879 ntBASIC18.65■□□□□ 0.58
TwistnbQ78WZ7 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
TwistnbQ78WZ7 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TwistnbQ78WZ7 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TwistnbQ78WZ7 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TwistnbQ78WZ7 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TwistnbQ78WZ7 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TwistnbQ78WZ7 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TwistnbQ78WZ7 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TwistnbQ78WZ7 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TwistnbQ78WZ7 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TwistnbQ78WZ7 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TwistnbQ78WZ7 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TwistnbQ78WZ7 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TwistnbQ78WZ7 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TwistnbQ78WZ7 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
TwistnbQ78WZ7 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TwistnbQ78WZ7 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
TwistnbQ78WZ7 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.64■□□□□ 0.57
TwistnbQ78WZ7 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TwistnbQ78WZ7 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TwistnbQ78WZ7 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.64■□□□□ 0.57
TwistnbQ78WZ7 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TwistnbQ78WZ7 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TwistnbQ78WZ7 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TwistnbQ78WZ7 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TwistnbQ78WZ7 Gm9959-201ENSMUST00000068277 390 ntBASIC18.63■□□□□ 0.57
TwistnbQ78WZ7 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TwistnbQ78WZ7 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.63■□□□□ 0.57
TwistnbQ78WZ7 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TwistnbQ78WZ7 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TwistnbQ78WZ7 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.63■□□□□ 0.57
TwistnbQ78WZ7 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TwistnbQ78WZ7 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.62■□□□□ 0.57
TwistnbQ78WZ7 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.62■□□□□ 0.57
TwistnbQ78WZ7 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms