Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ubfd1Q78JW9 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ubfd1Q78JW9 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Ubfd1Q78JW9 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Ubfd1Q78JW9 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Ubfd1Q78JW9 Gm15378-201ENSMUST00000121894 207 ntBASIC17.83■□□□□ 0.44
Ubfd1Q78JW9 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.83■□□□□ 0.44
Ubfd1Q78JW9 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ubfd1Q78JW9 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ubfd1Q78JW9 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ubfd1Q78JW9 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ubfd1Q78JW9 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ubfd1Q78JW9 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ubfd1Q78JW9 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ubfd1Q78JW9 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ubfd1Q78JW9 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ubfd1Q78JW9 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ubfd1Q78JW9 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ubfd1Q78JW9 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.82■□□□□ 0.44
Ubfd1Q78JW9 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Ubfd1Q78JW9 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ubfd1Q78JW9 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ubfd1Q78JW9 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ubfd1Q78JW9 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.81■□□□□ 0.44
Ubfd1Q78JW9 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ubfd1Q78JW9 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ubfd1Q78JW9 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ubfd1Q78JW9 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ubfd1Q78JW9 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ubfd1Q78JW9 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.81■□□□□ 0.44
Ubfd1Q78JW9 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ubfd1Q78JW9 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ubfd1Q78JW9 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ubfd1Q78JW9 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ubfd1Q78JW9 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ubfd1Q78JW9 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ubfd1Q78JW9 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ubfd1Q78JW9 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ubfd1Q78JW9 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.8■□□□□ 0.44
Ubfd1Q78JW9 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ubfd1Q78JW9 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.8■□□□□ 0.44
Ubfd1Q78JW9 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.8■□□□□ 0.44
Ubfd1Q78JW9 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.8■□□□□ 0.44
Ubfd1Q78JW9 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ubfd1Q78JW9 Gm38285-201ENSMUST00000192928 922 ntBASIC17.8■□□□□ 0.44
Ubfd1Q78JW9 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.8■□□□□ 0.44
Ubfd1Q78JW9 Gm10252-201ENSMUST00000209541 832 ntBASIC17.8■□□□□ 0.44
Ubfd1Q78JW9 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ubfd1Q78JW9 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ubfd1Q78JW9 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Ubfd1Q78JW9 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ubfd1Q78JW9 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ubfd1Q78JW9 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ubfd1Q78JW9 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.8■□□□□ 0.44
Ubfd1Q78JW9 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ubfd1Q78JW9 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ubfd1Q78JW9 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.79■□□□□ 0.44
Ubfd1Q78JW9 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ubfd1Q78JW9 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ubfd1Q78JW9 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ubfd1Q78JW9 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ubfd1Q78JW9 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.79■□□□□ 0.44
Ubfd1Q78JW9 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ubfd1Q78JW9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ubfd1Q78JW9 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ubfd1Q78JW9 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.79■□□□□ 0.44
Ubfd1Q78JW9 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ubfd1Q78JW9 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.79■□□□□ 0.44
Ubfd1Q78JW9 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.79■□□□□ 0.44
Ubfd1Q78JW9 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ubfd1Q78JW9 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ubfd1Q78JW9 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Ubfd1Q78JW9 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ubfd1Q78JW9 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ubfd1Q78JW9 BC021767-201ENSMUST00000126387 1716 ntBASIC17.78■□□□□ 0.44
Ubfd1Q78JW9 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ubfd1Q78JW9 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ubfd1Q78JW9 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ubfd1Q78JW9 Gm10698-201ENSMUST00000182663 604 ntBASIC17.78■□□□□ 0.44
Ubfd1Q78JW9 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.78■□□□□ 0.44
Ubfd1Q78JW9 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.78■□□□□ 0.44
Ubfd1Q78JW9 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.78■□□□□ 0.44
Ubfd1Q78JW9 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ubfd1Q78JW9 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ubfd1Q78JW9 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ubfd1Q78JW9 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ubfd1Q78JW9 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ubfd1Q78JW9 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Ubfd1Q78JW9 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ubfd1Q78JW9 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ubfd1Q78JW9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
Ubfd1Q78JW9 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
Ubfd1Q78JW9 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ubfd1Q78JW9 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ubfd1Q78JW9 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Ubfd1Q78JW9 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ubfd1Q78JW9 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Ubfd1Q78JW9 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ubfd1Q78JW9 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ubfd1Q78JW9 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms