Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx55Q6ZPL9 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx55Q6ZPL9 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx55Q6ZPL9 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx55Q6ZPL9 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx55Q6ZPL9 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx55Q6ZPL9 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Ddx55Q6ZPL9 Gm7367-201ENSMUST00000057611 492 ntBASIC20.98■□□□□ 0.95
Ddx55Q6ZPL9 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx55Q6ZPL9 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx55Q6ZPL9 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx55Q6ZPL9 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.98■□□□□ 0.95
Ddx55Q6ZPL9 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx55Q6ZPL9 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx55Q6ZPL9 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx55Q6ZPL9 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx55Q6ZPL9 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx55Q6ZPL9 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC20.97■□□□□ 0.95
Ddx55Q6ZPL9 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx55Q6ZPL9 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC20.97■□□□□ 0.95
Ddx55Q6ZPL9 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx55Q6ZPL9 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx55Q6ZPL9 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC20.97■□□□□ 0.95
Ddx55Q6ZPL9 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC20.97■□□□□ 0.95
Ddx55Q6ZPL9 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Ddx55Q6ZPL9 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx55Q6ZPL9 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx55Q6ZPL9 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx55Q6ZPL9 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx55Q6ZPL9 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx55Q6ZPL9 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.96■□□□□ 0.95
Ddx55Q6ZPL9 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx55Q6ZPL9 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx55Q6ZPL9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx55Q6ZPL9 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx55Q6ZPL9 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx55Q6ZPL9 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx55Q6ZPL9 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx55Q6ZPL9 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx55Q6ZPL9 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.96■□□□□ 0.95
Ddx55Q6ZPL9 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx55Q6ZPL9 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx55Q6ZPL9 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Ddx55Q6ZPL9 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx55Q6ZPL9 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC20.95■□□□□ 0.94
Ddx55Q6ZPL9 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.95■□□□□ 0.94
Ddx55Q6ZPL9 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Ddx55Q6ZPL9 AC159205.6-201ENSMUST00000224935 887 ntBASIC20.95■□□□□ 0.94
Ddx55Q6ZPL9 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx55Q6ZPL9 Gm10654-201ENSMUST00000098653 1633 ntBASIC20.95■□□□□ 0.94
Ddx55Q6ZPL9 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx55Q6ZPL9 Golph3-202ENSMUST00000226517 2359 ntBASIC20.95■□□□□ 0.94
Ddx55Q6ZPL9 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Ddx55Q6ZPL9 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ddx55Q6ZPL9 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
Ddx55Q6ZPL9 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Ddx55Q6ZPL9 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ddx55Q6ZPL9 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
Ddx55Q6ZPL9 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ddx55Q6ZPL9 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.94■□□□□ 0.94
Ddx55Q6ZPL9 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ddx55Q6ZPL9 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ddx55Q6ZPL9 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Ddx55Q6ZPL9 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Ddx55Q6ZPL9 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Ddx55Q6ZPL9 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx55Q6ZPL9 Gm44544-201ENSMUST00000207052 1844 ntBASIC20.93■□□□□ 0.94
Ddx55Q6ZPL9 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.93■□□□□ 0.94
Ddx55Q6ZPL9 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC20.93■□□□□ 0.94
Ddx55Q6ZPL9 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Ddx55Q6ZPL9 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx55Q6ZPL9 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx55Q6ZPL9 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx55Q6ZPL9 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx55Q6ZPL9 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx55Q6ZPL9 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Ddx55Q6ZPL9 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx55Q6ZPL9 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx55Q6ZPL9 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx55Q6ZPL9 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx55Q6ZPL9 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
Ddx55Q6ZPL9 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx55Q6ZPL9 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx55Q6ZPL9 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx55Q6ZPL9 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx55Q6ZPL9 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx55Q6ZPL9 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Ddx55Q6ZPL9 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx55Q6ZPL9 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.91■□□□□ 0.94
Ddx55Q6ZPL9 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ddx55Q6ZPL9 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ddx55Q6ZPL9 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ddx55Q6ZPL9 Gm18959-201ENSMUST00000208954 655 ntBASIC20.91■□□□□ 0.94
Ddx55Q6ZPL9 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ddx55Q6ZPL9 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ddx55Q6ZPL9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ddx55Q6ZPL9 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ddx55Q6ZPL9 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ddx55Q6ZPL9 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ddx55Q6ZPL9 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms