Protein–RNA interactions for Protein: Q6S5L9

Shc4, SHC-transforming protein 4, mousemouse

Predictions only

Length 626 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc4Q6S5L9 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.13■□□□□ 0.33
Shc4Q6S5L9 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.13■□□□□ 0.33
Shc4Q6S5L9 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Shc4Q6S5L9 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shc4Q6S5L9 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.13■□□□□ 0.33
Shc4Q6S5L9 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shc4Q6S5L9 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.13■□□□□ 0.33
Shc4Q6S5L9 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shc4Q6S5L9 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Shc4Q6S5L9 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shc4Q6S5L9 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shc4Q6S5L9 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shc4Q6S5L9 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Shc4Q6S5L9 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shc4Q6S5L9 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shc4Q6S5L9 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Shc4Q6S5L9 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shc4Q6S5L9 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shc4Q6S5L9 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Shc4Q6S5L9 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shc4Q6S5L9 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Shc4Q6S5L9 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shc4Q6S5L9 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Shc4Q6S5L9 Gm12896-201ENSMUST00000118430 226 ntBASIC17.12■□□□□ 0.33
Shc4Q6S5L9 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.12■□□□□ 0.33
Shc4Q6S5L9 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Shc4Q6S5L9 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Shc4Q6S5L9 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Shc4Q6S5L9 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.12■□□□□ 0.33
Shc4Q6S5L9 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shc4Q6S5L9 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shc4Q6S5L9 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shc4Q6S5L9 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shc4Q6S5L9 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Shc4Q6S5L9 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shc4Q6S5L9 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Shc4Q6S5L9 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.12■□□□□ 0.33
Shc4Q6S5L9 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.12■□□□□ 0.33
Shc4Q6S5L9 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shc4Q6S5L9 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shc4Q6S5L9 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Shc4Q6S5L9 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shc4Q6S5L9 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shc4Q6S5L9 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.11■□□□□ 0.33
Shc4Q6S5L9 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Shc4Q6S5L9 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Shc4Q6S5L9 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.11■□□□□ 0.33
Shc4Q6S5L9 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Shc4Q6S5L9 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Shc4Q6S5L9 Gm2559-201ENSMUST00000201323 363 ntBASIC17.11■□□□□ 0.33
Shc4Q6S5L9 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Shc4Q6S5L9 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Shc4Q6S5L9 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shc4Q6S5L9 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Shc4Q6S5L9 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.11■□□□□ 0.33
Shc4Q6S5L9 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shc4Q6S5L9 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shc4Q6S5L9 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Shc4Q6S5L9 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shc4Q6S5L9 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shc4Q6S5L9 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shc4Q6S5L9 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shc4Q6S5L9 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Shc4Q6S5L9 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shc4Q6S5L9 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Shc4Q6S5L9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shc4Q6S5L9 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Shc4Q6S5L9 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.1■□□□□ 0.33
Shc4Q6S5L9 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Shc4Q6S5L9 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.1■□□□□ 0.33
Shc4Q6S5L9 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.1■□□□□ 0.33
Shc4Q6S5L9 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shc4Q6S5L9 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shc4Q6S5L9 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shc4Q6S5L9 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shc4Q6S5L9 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shc4Q6S5L9 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.09■□□□□ 0.33
Shc4Q6S5L9 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Shc4Q6S5L9 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shc4Q6S5L9 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Shc4Q6S5L9 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Shc4Q6S5L9 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shc4Q6S5L9 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shc4Q6S5L9 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shc4Q6S5L9 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Shc4Q6S5L9 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.09■□□□□ 0.33
Shc4Q6S5L9 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.09■□□□□ 0.33
Shc4Q6S5L9 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.09■□□□□ 0.33
Shc4Q6S5L9 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shc4Q6S5L9 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shc4Q6S5L9 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.09■□□□□ 0.33
Shc4Q6S5L9 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shc4Q6S5L9 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.09■□□□□ 0.33
Shc4Q6S5L9 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Shc4Q6S5L9 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shc4Q6S5L9 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shc4Q6S5L9 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
Shc4Q6S5L9 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Shc4Q6S5L9 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Shc4Q6S5L9 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms