Protein–RNA interactions for Protein: Q6PFR5

Tra2a, Transformer-2 protein homolog alpha, mousemouse

Known RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tra2aQ6PFR5 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tra2aQ6PFR5 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tra2aQ6PFR5 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.95■□□□□ 0.46
Tra2aQ6PFR5 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tra2aQ6PFR5 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tra2aQ6PFR5 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tra2aQ6PFR5 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tra2aQ6PFR5 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tra2aQ6PFR5 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tra2aQ6PFR5 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tra2aQ6PFR5 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tra2aQ6PFR5 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Tra2aQ6PFR5 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tra2aQ6PFR5 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tra2aQ6PFR5 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Tra2aQ6PFR5 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tra2aQ6PFR5 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tra2aQ6PFR5 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tra2aQ6PFR5 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tra2aQ6PFR5 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.93■□□□□ 0.46
Tra2aQ6PFR5 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tra2aQ6PFR5 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.93■□□□□ 0.46
Tra2aQ6PFR5 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tra2aQ6PFR5 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tra2aQ6PFR5 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tra2aQ6PFR5 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tra2aQ6PFR5 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tra2aQ6PFR5 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.93■□□□□ 0.46
Tra2aQ6PFR5 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tra2aQ6PFR5 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tra2aQ6PFR5 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tra2aQ6PFR5 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Tra2aQ6PFR5 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tra2aQ6PFR5 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Tra2aQ6PFR5 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tra2aQ6PFR5 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Tra2aQ6PFR5 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tra2aQ6PFR5 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.92■□□□□ 0.46
Tra2aQ6PFR5 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Tra2aQ6PFR5 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.92■□□□□ 0.46
Tra2aQ6PFR5 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tra2aQ6PFR5 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.92■□□□□ 0.46
Tra2aQ6PFR5 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.92■□□□□ 0.46
Tra2aQ6PFR5 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.91■□□□□ 0.46
Tra2aQ6PFR5 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tra2aQ6PFR5 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tra2aQ6PFR5 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tra2aQ6PFR5 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tra2aQ6PFR5 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tra2aQ6PFR5 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Tra2aQ6PFR5 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tra2aQ6PFR5 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Tra2aQ6PFR5 Gm7889-201ENSMUST00000185591 958 ntBASIC17.91■□□□□ 0.46
Tra2aQ6PFR5 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.91■□□□□ 0.46
Tra2aQ6PFR5 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Tra2aQ6PFR5 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tra2aQ6PFR5 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tra2aQ6PFR5 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Tra2aQ6PFR5 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tra2aQ6PFR5 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tra2aQ6PFR5 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tra2aQ6PFR5 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tra2aQ6PFR5 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tra2aQ6PFR5 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.9■□□□□ 0.46
Tra2aQ6PFR5 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Tra2aQ6PFR5 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tra2aQ6PFR5 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Tra2aQ6PFR5 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tra2aQ6PFR5 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tra2aQ6PFR5 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Tra2aQ6PFR5 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tra2aQ6PFR5 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Tra2aQ6PFR5 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Tra2aQ6PFR5 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.9■□□□□ 0.46
Tra2aQ6PFR5 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tra2aQ6PFR5 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tra2aQ6PFR5 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.9■□□□□ 0.46
Tra2aQ6PFR5 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tra2aQ6PFR5 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
Tra2aQ6PFR5 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Tra2aQ6PFR5 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
Tra2aQ6PFR5 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Tra2aQ6PFR5 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tra2aQ6PFR5 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Tra2aQ6PFR5 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tra2aQ6PFR5 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tra2aQ6PFR5 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tra2aQ6PFR5 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Tra2aQ6PFR5 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.89■□□□□ 0.45
Tra2aQ6PFR5 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.89■□□□□ 0.45
Tra2aQ6PFR5 Mir2861-201ENSMUST00000175539 82 ntBASIC17.89■□□□□ 0.45
Tra2aQ6PFR5 Gm27463-201ENSMUST00000183569 57 ntBASIC17.89■□□□□ 0.45
Tra2aQ6PFR5 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
Tra2aQ6PFR5 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tra2aQ6PFR5 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.89■□□□□ 0.45
Tra2aQ6PFR5 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
Tra2aQ6PFR5 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Tra2aQ6PFR5 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tra2aQ6PFR5 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tra2aQ6PFR5 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms