Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Herc4Q6PAV2 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Herc4Q6PAV2 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Herc4Q6PAV2 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.24■□□□□ 0.83
Herc4Q6PAV2 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Herc4Q6PAV2 Gm37179-201ENSMUST00000194862 823 ntBASIC20.24■□□□□ 0.83
Herc4Q6PAV2 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.24■□□□□ 0.83
Herc4Q6PAV2 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Herc4Q6PAV2 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Herc4Q6PAV2 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Herc4Q6PAV2 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Herc4Q6PAV2 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Herc4Q6PAV2 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Herc4Q6PAV2 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Herc4Q6PAV2 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Herc4Q6PAV2 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Herc4Q6PAV2 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Herc4Q6PAV2 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.23■□□□□ 0.83
Herc4Q6PAV2 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Herc4Q6PAV2 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.23■□□□□ 0.83
Herc4Q6PAV2 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.23■□□□□ 0.83
Herc4Q6PAV2 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Herc4Q6PAV2 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Herc4Q6PAV2 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Herc4Q6PAV2 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Herc4Q6PAV2 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Herc4Q6PAV2 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.23■□□□□ 0.83
Herc4Q6PAV2 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Herc4Q6PAV2 Gm7290-201ENSMUST00000104990 617 ntBASIC20.22■□□□□ 0.83
Herc4Q6PAV2 Gm12918-201ENSMUST00000120234 636 ntBASIC20.22■□□□□ 0.83
Herc4Q6PAV2 Gm15710-201ENSMUST00000121821 636 ntBASIC20.22■□□□□ 0.83
Herc4Q6PAV2 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.22■□□□□ 0.83
Herc4Q6PAV2 Gm5075-201ENSMUST00000196916 622 ntBASIC20.22■□□□□ 0.83
Herc4Q6PAV2 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Herc4Q6PAV2 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.22■□□□□ 0.83
Herc4Q6PAV2 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.22■□□□□ 0.83
Herc4Q6PAV2 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.22■□□□□ 0.83
Herc4Q6PAV2 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Herc4Q6PAV2 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Herc4Q6PAV2 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Herc4Q6PAV2 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Herc4Q6PAV2 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Herc4Q6PAV2 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Herc4Q6PAV2 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Herc4Q6PAV2 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Herc4Q6PAV2 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Herc4Q6PAV2 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Herc4Q6PAV2 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Herc4Q6PAV2 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Herc4Q6PAV2 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.21■□□□□ 0.83
Herc4Q6PAV2 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
Herc4Q6PAV2 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Herc4Q6PAV2 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
Herc4Q6PAV2 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.2■□□□□ 0.82
Herc4Q6PAV2 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Herc4Q6PAV2 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Herc4Q6PAV2 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.2■□□□□ 0.82
Herc4Q6PAV2 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Herc4Q6PAV2 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Herc4Q6PAV2 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Herc4Q6PAV2 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Herc4Q6PAV2 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.2■□□□□ 0.82
Herc4Q6PAV2 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Herc4Q6PAV2 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.2■□□□□ 0.82
Herc4Q6PAV2 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Herc4Q6PAV2 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Herc4Q6PAV2 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Herc4Q6PAV2 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.19■□□□□ 0.82
Herc4Q6PAV2 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Herc4Q6PAV2 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Herc4Q6PAV2 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Herc4Q6PAV2 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Herc4Q6PAV2 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.19■□□□□ 0.82
Herc4Q6PAV2 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Herc4Q6PAV2 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Herc4Q6PAV2 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.19■□□□□ 0.82
Herc4Q6PAV2 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Herc4Q6PAV2 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Herc4Q6PAV2 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
Herc4Q6PAV2 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.18■□□□□ 0.82
Herc4Q6PAV2 Gm6211-202ENSMUST00000167849 925 ntBASIC20.18■□□□□ 0.82
Herc4Q6PAV2 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Herc4Q6PAV2 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Herc4Q6PAV2 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Herc4Q6PAV2 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Herc4Q6PAV2 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Herc4Q6PAV2 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Herc4Q6PAV2 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC20.18■□□□□ 0.82
Herc4Q6PAV2 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Herc4Q6PAV2 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.18■□□□□ 0.82
Herc4Q6PAV2 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Herc4Q6PAV2 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Herc4Q6PAV2 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Herc4Q6PAV2 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Herc4Q6PAV2 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Herc4Q6PAV2 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Herc4Q6PAV2 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Herc4Q6PAV2 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Herc4Q6PAV2 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Herc4Q6PAV2 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms