Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcd3Q6P9Z1 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Smarcd3Q6P9Z1 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcd3Q6P9Z1 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcd3Q6P9Z1 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcd3Q6P9Z1 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcd3Q6P9Z1 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC16.82■□□□□ 0.28
Smarcd3Q6P9Z1 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcd3Q6P9Z1 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcd3Q6P9Z1 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcd3Q6P9Z1 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcd3Q6P9Z1 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcd3Q6P9Z1 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcd3Q6P9Z1 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcd3Q6P9Z1 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcd3Q6P9Z1 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcd3Q6P9Z1 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.81■□□□□ 0.28
Smarcd3Q6P9Z1 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcd3Q6P9Z1 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcd3Q6P9Z1 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcd3Q6P9Z1 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.81■□□□□ 0.28
Smarcd3Q6P9Z1 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcd3Q6P9Z1 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC16.81■□□□□ 0.28
Smarcd3Q6P9Z1 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcd3Q6P9Z1 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcd3Q6P9Z1 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Smarcd3Q6P9Z1 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcd3Q6P9Z1 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcd3Q6P9Z1 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.81■□□□□ 0.28
Smarcd3Q6P9Z1 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Smarcd3Q6P9Z1 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcd3Q6P9Z1 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcd3Q6P9Z1 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcd3Q6P9Z1 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcd3Q6P9Z1 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcd3Q6P9Z1 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Smarcd3Q6P9Z1 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcd3Q6P9Z1 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcd3Q6P9Z1 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.8■□□□□ 0.28
Smarcd3Q6P9Z1 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcd3Q6P9Z1 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcd3Q6P9Z1 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcd3Q6P9Z1 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.8■□□□□ 0.28
Smarcd3Q6P9Z1 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.8■□□□□ 0.28
Smarcd3Q6P9Z1 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.8■□□□□ 0.28
Smarcd3Q6P9Z1 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcd3Q6P9Z1 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcd3Q6P9Z1 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcd3Q6P9Z1 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcd3Q6P9Z1 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcd3Q6P9Z1 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcd3Q6P9Z1 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcd3Q6P9Z1 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcd3Q6P9Z1 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.79■□□□□ 0.28
Smarcd3Q6P9Z1 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcd3Q6P9Z1 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Smarcd3Q6P9Z1 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcd3Q6P9Z1 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Smarcd3Q6P9Z1 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcd3Q6P9Z1 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcd3Q6P9Z1 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.79■□□□□ 0.28
Smarcd3Q6P9Z1 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcd3Q6P9Z1 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.79■□□□□ 0.28
Smarcd3Q6P9Z1 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Smarcd3Q6P9Z1 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.79■□□□□ 0.28
Smarcd3Q6P9Z1 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcd3Q6P9Z1 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcd3Q6P9Z1 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcd3Q6P9Z1 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcd3Q6P9Z1 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.79■□□□□ 0.28
Smarcd3Q6P9Z1 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcd3Q6P9Z1 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.79■□□□□ 0.28
Smarcd3Q6P9Z1 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcd3Q6P9Z1 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcd3Q6P9Z1 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcd3Q6P9Z1 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcd3Q6P9Z1 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcd3Q6P9Z1 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcd3Q6P9Z1 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.78■□□□□ 0.28
Smarcd3Q6P9Z1 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.78■□□□□ 0.28
Smarcd3Q6P9Z1 Gm45417-201ENSMUST00000209533 758 ntBASIC16.78■□□□□ 0.28
Smarcd3Q6P9Z1 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcd3Q6P9Z1 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcd3Q6P9Z1 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcd3Q6P9Z1 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcd3Q6P9Z1 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Smarcd3Q6P9Z1 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.78■□□□□ 0.28
Smarcd3Q6P9Z1 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcd3Q6P9Z1 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcd3Q6P9Z1 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcd3Q6P9Z1 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcd3Q6P9Z1 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcd3Q6P9Z1 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.77■□□□□ 0.28
Smarcd3Q6P9Z1 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcd3Q6P9Z1 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcd3Q6P9Z1 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcd3Q6P9Z1 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcd3Q6P9Z1 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcd3Q6P9Z1 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smarcd3Q6P9Z1 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.77■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms