Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rtl3Q6P1Y1 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rtl3Q6P1Y1 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rtl3Q6P1Y1 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rtl3Q6P1Y1 Golph3-205ENSMUST00000228671 2842 ntBASIC18.95■□□□□ 0.62
Rtl3Q6P1Y1 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.95■□□□□ 0.62
Rtl3Q6P1Y1 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rtl3Q6P1Y1 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rtl3Q6P1Y1 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.95■□□□□ 0.62
Rtl3Q6P1Y1 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Rtl3Q6P1Y1 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.95■□□□□ 0.62
Rtl3Q6P1Y1 Gm20049-201ENSMUST00000219950 730 ntBASIC18.95■□□□□ 0.62
Rtl3Q6P1Y1 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Rtl3Q6P1Y1 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rtl3Q6P1Y1 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rtl3Q6P1Y1 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rtl3Q6P1Y1 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rtl3Q6P1Y1 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rtl3Q6P1Y1 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rtl3Q6P1Y1 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rtl3Q6P1Y1 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rtl3Q6P1Y1 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rtl3Q6P1Y1 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.94■□□□□ 0.62
Rtl3Q6P1Y1 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rtl3Q6P1Y1 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rtl3Q6P1Y1 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rtl3Q6P1Y1 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Rtl3Q6P1Y1 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.94■□□□□ 0.62
Rtl3Q6P1Y1 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.94■□□□□ 0.62
Rtl3Q6P1Y1 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rtl3Q6P1Y1 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rtl3Q6P1Y1 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.94■□□□□ 0.62
Rtl3Q6P1Y1 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.94■□□□□ 0.62
Rtl3Q6P1Y1 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rtl3Q6P1Y1 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rtl3Q6P1Y1 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rtl3Q6P1Y1 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rtl3Q6P1Y1 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
Rtl3Q6P1Y1 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.93■□□□□ 0.62
Rtl3Q6P1Y1 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rtl3Q6P1Y1 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Rtl3Q6P1Y1 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rtl3Q6P1Y1 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.93■□□□□ 0.62
Rtl3Q6P1Y1 Rab3c-203ENSMUST00000224180 967 ntBASIC18.93■□□□□ 0.62
Rtl3Q6P1Y1 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rtl3Q6P1Y1 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rtl3Q6P1Y1 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rtl3Q6P1Y1 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rtl3Q6P1Y1 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rtl3Q6P1Y1 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rtl3Q6P1Y1 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rtl3Q6P1Y1 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.92■□□□□ 0.62
Rtl3Q6P1Y1 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rtl3Q6P1Y1 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Rtl3Q6P1Y1 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rtl3Q6P1Y1 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rtl3Q6P1Y1 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.92■□□□□ 0.62
Rtl3Q6P1Y1 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rtl3Q6P1Y1 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.92■□□□□ 0.62
Rtl3Q6P1Y1 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.92■□□□□ 0.62
Rtl3Q6P1Y1 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.92■□□□□ 0.62
Rtl3Q6P1Y1 Gm10252-201ENSMUST00000209541 832 ntBASIC18.92■□□□□ 0.62
Rtl3Q6P1Y1 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rtl3Q6P1Y1 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rtl3Q6P1Y1 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rtl3Q6P1Y1 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rtl3Q6P1Y1 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Rtl3Q6P1Y1 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rtl3Q6P1Y1 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.92■□□□□ 0.62
Rtl3Q6P1Y1 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rtl3Q6P1Y1 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Rtl3Q6P1Y1 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.92■□□□□ 0.62
Rtl3Q6P1Y1 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Rtl3Q6P1Y1 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rtl3Q6P1Y1 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rtl3Q6P1Y1 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rtl3Q6P1Y1 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rtl3Q6P1Y1 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.91■□□□□ 0.62
Rtl3Q6P1Y1 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rtl3Q6P1Y1 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rtl3Q6P1Y1 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rtl3Q6P1Y1 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rtl3Q6P1Y1 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rtl3Q6P1Y1 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Rtl3Q6P1Y1 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rtl3Q6P1Y1 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rtl3Q6P1Y1 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Rtl3Q6P1Y1 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rtl3Q6P1Y1 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rtl3Q6P1Y1 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Rtl3Q6P1Y1 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Rtl3Q6P1Y1 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rtl3Q6P1Y1 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rtl3Q6P1Y1 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rtl3Q6P1Y1 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Rtl3Q6P1Y1 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rtl3Q6P1Y1 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rtl3Q6P1Y1 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rtl3Q6P1Y1 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rtl3Q6P1Y1 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms