Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sdc3Q64519 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sdc3Q64519 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sdc3Q64519 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Sdc3Q64519 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.55■□□□□ 0.4
Sdc3Q64519 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sdc3Q64519 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sdc3Q64519 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Sdc3Q64519 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.55■□□□□ 0.4
Sdc3Q64519 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.55■□□□□ 0.4
Sdc3Q64519 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sdc3Q64519 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sdc3Q64519 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sdc3Q64519 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sdc3Q64519 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sdc3Q64519 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.54■□□□□ 0.4
Sdc3Q64519 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sdc3Q64519 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Sdc3Q64519 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.54■□□□□ 0.4
Sdc3Q64519 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sdc3Q64519 Rab3c-203ENSMUST00000224180 967 ntBASIC17.54■□□□□ 0.4
Sdc3Q64519 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Sdc3Q64519 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Sdc3Q64519 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sdc3Q64519 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sdc3Q64519 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sdc3Q64519 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sdc3Q64519 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.54■□□□□ 0.4
Sdc3Q64519 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sdc3Q64519 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sdc3Q64519 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sdc3Q64519 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sdc3Q64519 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.54■□□□□ 0.4
Sdc3Q64519 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sdc3Q64519 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sdc3Q64519 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sdc3Q64519 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.53■□□□□ 0.4
Sdc3Q64519 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sdc3Q64519 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sdc3Q64519 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sdc3Q64519 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sdc3Q64519 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sdc3Q64519 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Sdc3Q64519 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Sdc3Q64519 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.53■□□□□ 0.4
Sdc3Q64519 Gm20049-201ENSMUST00000219950 730 ntBASIC17.53■□□□□ 0.4
Sdc3Q64519 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sdc3Q64519 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sdc3Q64519 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sdc3Q64519 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sdc3Q64519 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sdc3Q64519 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sdc3Q64519 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.53■□□□□ 0.4
Sdc3Q64519 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sdc3Q64519 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sdc3Q64519 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.53■□□□□ 0.4
Sdc3Q64519 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.53■□□□□ 0.4
Sdc3Q64519 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sdc3Q64519 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Sdc3Q64519 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sdc3Q64519 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sdc3Q64519 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Sdc3Q64519 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sdc3Q64519 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sdc3Q64519 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sdc3Q64519 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Sdc3Q64519 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Sdc3Q64519 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sdc3Q64519 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Sdc3Q64519 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.52■□□□□ 0.4
Sdc3Q64519 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sdc3Q64519 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Sdc3Q64519 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.52■□□□□ 0.4
Sdc3Q64519 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.52■□□□□ 0.4
Sdc3Q64519 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sdc3Q64519 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Sdc3Q64519 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sdc3Q64519 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sdc3Q64519 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Sdc3Q64519 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sdc3Q64519 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sdc3Q64519 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sdc3Q64519 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sdc3Q64519 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Sdc3Q64519 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sdc3Q64519 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Sdc3Q64519 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sdc3Q64519 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sdc3Q64519 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sdc3Q64519 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sdc3Q64519 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sdc3Q64519 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Sdc3Q64519 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.51■□□□□ 0.39
Sdc3Q64519 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sdc3Q64519 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sdc3Q64519 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Sdc3Q64519 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sdc3Q64519 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Sdc3Q64519 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sdc3Q64519 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms