Protein–RNA interactions for Protein: Q64287

Irf4, Interferon regulatory factor 4, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf4Q64287 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.98■□□□□ 0.47
Irf4Q64287 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Irf4Q64287 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Irf4Q64287 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Irf4Q64287 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.98■□□□□ 0.47
Irf4Q64287 Gm5643-201ENSMUST00000117081 966 ntBASIC17.98■□□□□ 0.47
Irf4Q64287 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.98■□□□□ 0.47
Irf4Q64287 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Irf4Q64287 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.98■□□□□ 0.47
Irf4Q64287 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.98■□□□□ 0.47
Irf4Q64287 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Irf4Q64287 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Irf4Q64287 Flg-201ENSMUST00000050758 1488 ntBASIC17.98■□□□□ 0.47
Irf4Q64287 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Irf4Q64287 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Irf4Q64287 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Irf4Q64287 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Irf4Q64287 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
Irf4Q64287 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Irf4Q64287 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Irf4Q64287 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Irf4Q64287 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Irf4Q64287 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Irf4Q64287 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Irf4Q64287 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Irf4Q64287 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Irf4Q64287 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
Irf4Q64287 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.97■□□□□ 0.47
Irf4Q64287 Gm10812-201ENSMUST00000099864 546 ntBASIC17.97■□□□□ 0.47
Irf4Q64287 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Irf4Q64287 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.97■□□□□ 0.47
Irf4Q64287 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.97■□□□□ 0.47
Irf4Q64287 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Irf4Q64287 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
Irf4Q64287 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Irf4Q64287 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Irf4Q64287 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.96■□□□□ 0.47
Irf4Q64287 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Irf4Q64287 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Irf4Q64287 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Irf4Q64287 Gm11927-201ENSMUST00000118472 759 ntBASIC17.96■□□□□ 0.47
Irf4Q64287 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Irf4Q64287 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Irf4Q64287 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Irf4Q64287 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Irf4Q64287 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Irf4Q64287 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Irf4Q64287 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
Irf4Q64287 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Irf4Q64287 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Irf4Q64287 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Irf4Q64287 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Irf4Q64287 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.95■□□□□ 0.46
Irf4Q64287 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Irf4Q64287 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Irf4Q64287 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Irf4Q64287 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Irf4Q64287 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Irf4Q64287 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Irf4Q64287 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Irf4Q64287 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.95■□□□□ 0.46
Irf4Q64287 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Irf4Q64287 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Irf4Q64287 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Irf4Q64287 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.94■□□□□ 0.46
Irf4Q64287 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Irf4Q64287 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Irf4Q64287 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Irf4Q64287 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Irf4Q64287 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Irf4Q64287 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.94■□□□□ 0.46
Irf4Q64287 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.94■□□□□ 0.46
Irf4Q64287 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.94■□□□□ 0.46
Irf4Q64287 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Irf4Q64287 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.94■□□□□ 0.46
Irf4Q64287 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Irf4Q64287 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Irf4Q64287 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Irf4Q64287 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Irf4Q64287 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Irf4Q64287 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Irf4Q64287 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Irf4Q64287 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.93■□□□□ 0.46
Irf4Q64287 Gm18666-201ENSMUST00000190039 958 ntBASIC17.93■□□□□ 0.46
Irf4Q64287 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Irf4Q64287 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Irf4Q64287 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.93■□□□□ 0.46
Irf4Q64287 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Irf4Q64287 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Irf4Q64287 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Irf4Q64287 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Irf4Q64287 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Irf4Q64287 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Irf4Q64287 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.93■□□□□ 0.46
Irf4Q64287 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Irf4Q64287 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.92■□□□□ 0.46
Irf4Q64287 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Irf4Q64287 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.92■□□□□ 0.46
Irf4Q64287 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Irf4Q64287 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms