Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Scn9aQ62205 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Scn9aQ62205 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Scn9aQ62205 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Scn9aQ62205 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scn9aQ62205 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Scn9aQ62205 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC21.8■■□□□ 1.08
Scn9aQ62205 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scn9aQ62205 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scn9aQ62205 Gm45058-201ENSMUST00000205810 766 ntBASIC21.8■■□□□ 1.08
Scn9aQ62205 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scn9aQ62205 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Scn9aQ62205 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC21.8■■□□□ 1.08
Scn9aQ62205 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Scn9aQ62205 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC21.79■■□□□ 1.08
Scn9aQ62205 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC21.79■■□□□ 1.08
Scn9aQ62205 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scn9aQ62205 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scn9aQ62205 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scn9aQ62205 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Scn9aQ62205 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
Scn9aQ62205 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scn9aQ62205 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scn9aQ62205 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Scn9aQ62205 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.79■■□□□ 1.08
Scn9aQ62205 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scn9aQ62205 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC21.79■■□□□ 1.08
Scn9aQ62205 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Scn9aQ62205 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC21.79■■□□□ 1.08
Scn9aQ62205 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scn9aQ62205 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Scn9aQ62205 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Scn9aQ62205 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scn9aQ62205 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Scn9aQ62205 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Scn9aQ62205 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Scn9aQ62205 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC21.78■■□□□ 1.08
Scn9aQ62205 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Scn9aQ62205 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
Scn9aQ62205 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Scn9aQ62205 AC154471.1-201ENSMUST00000224418 436 ntBASIC21.78■■□□□ 1.08
Scn9aQ62205 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Scn9aQ62205 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Scn9aQ62205 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Scn9aQ62205 Gm15853-202ENSMUST00000195518 2041 ntBASIC21.77■■□□□ 1.08
Scn9aQ62205 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Scn9aQ62205 Gm17971-201ENSMUST00000190239 806 ntBASIC21.77■■□□□ 1.08
Scn9aQ62205 Gm37805-201ENSMUST00000192612 1094 ntBASIC21.77■■□□□ 1.08
Scn9aQ62205 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Scn9aQ62205 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Scn9aQ62205 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Scn9aQ62205 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Scn9aQ62205 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC21.76■■□□□ 1.07
Scn9aQ62205 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
Scn9aQ62205 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Scn9aQ62205 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Scn9aQ62205 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Scn9aQ62205 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC21.76■■□□□ 1.07
Scn9aQ62205 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC21.76■■□□□ 1.07
Scn9aQ62205 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Scn9aQ62205 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Scn9aQ62205 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Scn9aQ62205 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC21.75■■□□□ 1.07
Scn9aQ62205 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Scn9aQ62205 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Scn9aQ62205 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Scn9aQ62205 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Scn9aQ62205 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Scn9aQ62205 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Scn9aQ62205 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Scn9aQ62205 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Scn9aQ62205 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Scn9aQ62205 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Scn9aQ62205 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
Scn9aQ62205 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Scn9aQ62205 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Scn9aQ62205 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Scn9aQ62205 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Scn9aQ62205 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Scn9aQ62205 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Scn9aQ62205 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Scn9aQ62205 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Scn9aQ62205 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Scn9aQ62205 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Scn9aQ62205 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Scn9aQ62205 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Scn9aQ62205 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Scn9aQ62205 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Scn9aQ62205 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Scn9aQ62205 AC159205.3-201ENSMUST00000224614 874 ntBASIC21.73■■□□□ 1.07
Scn9aQ62205 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Scn9aQ62205 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Scn9aQ62205 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Scn9aQ62205 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
Scn9aQ62205 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Scn9aQ62205 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC21.72■■□□□ 1.07
Scn9aQ62205 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Scn9aQ62205 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Scn9aQ62205 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Scn9aQ62205 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms