Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rai1Q61818 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Rai1Q61818 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.79■□□□□ 0.44
Rai1Q61818 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.79■□□□□ 0.44
Rai1Q61818 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Rai1Q61818 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Rai1Q61818 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rai1Q61818 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rai1Q61818 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rai1Q61818 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.79■□□□□ 0.44
Rai1Q61818 Gm10819-201ENSMUST00000099988 561 ntBASIC17.79■□□□□ 0.44
Rai1Q61818 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Rai1Q61818 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rai1Q61818 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rai1Q61818 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rai1Q61818 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rai1Q61818 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.78■□□□□ 0.44
Rai1Q61818 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.78■□□□□ 0.44
Rai1Q61818 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rai1Q61818 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rai1Q61818 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.78■□□□□ 0.44
Rai1Q61818 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rai1Q61818 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Rai1Q61818 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rai1Q61818 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.78■□□□□ 0.44
Rai1Q61818 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.78■□□□□ 0.44
Rai1Q61818 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rai1Q61818 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rai1Q61818 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Rai1Q61818 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rai1Q61818 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rai1Q61818 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Rai1Q61818 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.77■□□□□ 0.44
Rai1Q61818 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Rai1Q61818 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Rai1Q61818 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rai1Q61818 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rai1Q61818 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rai1Q61818 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
Rai1Q61818 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rai1Q61818 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rai1Q61818 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.76■□□□□ 0.43
Rai1Q61818 Gm6659-201ENSMUST00000174752 547 ntBASIC17.76■□□□□ 0.43
Rai1Q61818 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.76■□□□□ 0.43
Rai1Q61818 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rai1Q61818 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Rai1Q61818 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rai1Q61818 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rai1Q61818 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rai1Q61818 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rai1Q61818 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rai1Q61818 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.75■□□□□ 0.43
Rai1Q61818 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rai1Q61818 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Rai1Q61818 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rai1Q61818 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rai1Q61818 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Rai1Q61818 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Rai1Q61818 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rai1Q61818 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.75■□□□□ 0.43
Rai1Q61818 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rai1Q61818 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rai1Q61818 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.75■□□□□ 0.43
Rai1Q61818 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Rai1Q61818 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rai1Q61818 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rai1Q61818 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Rai1Q61818 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Rai1Q61818 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.74■□□□□ 0.43
Rai1Q61818 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rai1Q61818 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rai1Q61818 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rai1Q61818 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rai1Q61818 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rai1Q61818 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rai1Q61818 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.74■□□□□ 0.43
Rai1Q61818 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rai1Q61818 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Rai1Q61818 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rai1Q61818 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rai1Q61818 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rai1Q61818 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rai1Q61818 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rai1Q61818 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rai1Q61818 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rai1Q61818 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rai1Q61818 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rai1Q61818 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rai1Q61818 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rai1Q61818 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rai1Q61818 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rai1Q61818 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rai1Q61818 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.73■□□□□ 0.43
Rai1Q61818 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rai1Q61818 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rai1Q61818 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rai1Q61818 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.72■□□□□ 0.43
Rai1Q61818 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rai1Q61818 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rai1Q61818 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms