Protein–RNA interactions for Protein: Q61735

Cd47, Leukocyte surface antigen CD47, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd47Q61735 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cd47Q61735 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cd47Q61735 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd47Q61735 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Cd47Q61735 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd47Q61735 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd47Q61735 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Cd47Q61735 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd47Q61735 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd47Q61735 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cd47Q61735 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cd47Q61735 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd47Q61735 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd47Q61735 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Cd47Q61735 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Cd47Q61735 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd47Q61735 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Cd47Q61735 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd47Q61735 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Cd47Q61735 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cd47Q61735 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.68■□□□□ 0.26
Cd47Q61735 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Cd47Q61735 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd47Q61735 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd47Q61735 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd47Q61735 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cd47Q61735 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cd47Q61735 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cd47Q61735 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Cd47Q61735 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cd47Q61735 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cd47Q61735 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.67■□□□□ 0.26
Cd47Q61735 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cd47Q61735 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.67■□□□□ 0.26
Cd47Q61735 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.67■□□□□ 0.26
Cd47Q61735 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Cd47Q61735 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cd47Q61735 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cd47Q61735 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cd47Q61735 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cd47Q61735 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cd47Q61735 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Cd47Q61735 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cd47Q61735 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.66■□□□□ 0.26
Cd47Q61735 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cd47Q61735 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cd47Q61735 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cd47Q61735 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cd47Q61735 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cd47Q61735 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cd47Q61735 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cd47Q61735 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cd47Q61735 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cd47Q61735 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cd47Q61735 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd47Q61735 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd47Q61735 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Cd47Q61735 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.65■□□□□ 0.26
Cd47Q61735 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd47Q61735 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd47Q61735 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Cd47Q61735 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.65■□□□□ 0.26
Cd47Q61735 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Cd47Q61735 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Cd47Q61735 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.65■□□□□ 0.26
Cd47Q61735 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Cd47Q61735 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd47Q61735 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd47Q61735 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Cd47Q61735 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Cd47Q61735 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.64■□□□□ 0.25
Cd47Q61735 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cd47Q61735 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cd47Q61735 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cd47Q61735 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.64■□□□□ 0.25
Cd47Q61735 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.64■□□□□ 0.25
Cd47Q61735 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cd47Q61735 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cd47Q61735 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.64■□□□□ 0.25
Cd47Q61735 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cd47Q61735 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cd47Q61735 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cd47Q61735 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cd47Q61735 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cd47Q61735 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cd47Q61735 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cd47Q61735 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Cd47Q61735 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd47Q61735 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cd47Q61735 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd47Q61735 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.63■□□□□ 0.25
Cd47Q61735 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd47Q61735 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd47Q61735 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd47Q61735 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd47Q61735 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.63■□□□□ 0.25
Cd47Q61735 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd47Q61735 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Cd47Q61735 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd47Q61735 Gm9988-201ENSMUST00000069786 435 ntBASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms