Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Mir6982-201ENSMUST00000184354 68 ntBASIC21.15■□□□□ 0.98
Scnn1aQ61180 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Scnn1aQ61180 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Scnn1aQ61180 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Scnn1aQ61180 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Scnn1aQ61180 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Scnn1aQ61180 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.14■□□□□ 0.97
Scnn1aQ61180 Gm44544-201ENSMUST00000207052 1844 ntBASIC21.14■□□□□ 0.97
Scnn1aQ61180 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Scnn1aQ61180 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Scnn1aQ61180 Gm715-201ENSMUST00000117865 831 ntBASIC21.14■□□□□ 0.97
Scnn1aQ61180 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Scnn1aQ61180 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Scnn1aQ61180 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC21.14■□□□□ 0.97
Scnn1aQ61180 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Scnn1aQ61180 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Scnn1aQ61180 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Scnn1aQ61180 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Scnn1aQ61180 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
Scnn1aQ61180 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Scnn1aQ61180 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Scnn1aQ61180 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Scnn1aQ61180 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scnn1aQ61180 Gm9194-201ENSMUST00000220749 1447 ntBASIC21.13■□□□□ 0.97
Scnn1aQ61180 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scnn1aQ61180 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scnn1aQ61180 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scnn1aQ61180 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scnn1aQ61180 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Scnn1aQ61180 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scnn1aQ61180 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scnn1aQ61180 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scnn1aQ61180 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scnn1aQ61180 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC21.13■□□□□ 0.97
Scnn1aQ61180 Gm9885-202ENSMUST00000186234 2209 ntBASIC21.13■□□□□ 0.97
Scnn1aQ61180 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scnn1aQ61180 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scnn1aQ61180 Gm45560-201ENSMUST00000211492 1472 ntBASIC21.13■□□□□ 0.97
Scnn1aQ61180 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scnn1aQ61180 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scnn1aQ61180 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scnn1aQ61180 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC21.12■□□□□ 0.97
Scnn1aQ61180 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC21.12■□□□□ 0.97
Scnn1aQ61180 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC21.12■□□□□ 0.97
Scnn1aQ61180 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scnn1aQ61180 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scnn1aQ61180 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scnn1aQ61180 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scnn1aQ61180 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
Scnn1aQ61180 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scnn1aQ61180 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Scnn1aQ61180 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Scnn1aQ61180 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scnn1aQ61180 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scnn1aQ61180 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scnn1aQ61180 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scnn1aQ61180 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
Scnn1aQ61180 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scnn1aQ61180 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC21.11■□□□□ 0.97
Scnn1aQ61180 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Scnn1aQ61180 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Scnn1aQ61180 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scnn1aQ61180 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scnn1aQ61180 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scnn1aQ61180 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scnn1aQ61180 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC21.1■□□□□ 0.97
Scnn1aQ61180 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Scnn1aQ61180 Gm18025-201ENSMUST00000221733 862 ntBASIC21.1■□□□□ 0.97
Scnn1aQ61180 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scnn1aQ61180 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Scnn1aQ61180 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scnn1aQ61180 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Scnn1aQ61180 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scnn1aQ61180 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scnn1aQ61180 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scnn1aQ61180 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC21.09■□□□□ 0.97
Scnn1aQ61180 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Scnn1aQ61180 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scnn1aQ61180 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Scnn1aQ61180 AC175538.1-201ENSMUST00000225343 1269 ntBASIC21.09■□□□□ 0.97
Scnn1aQ61180 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Scnn1aQ61180 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scnn1aQ61180 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scnn1aQ61180 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Scnn1aQ61180 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Scnn1aQ61180 Mir6349-201ENSMUST00000184059 97 ntBASIC21.08■□□□□ 0.97
Scnn1aQ61180 Mir7071-201ENSMUST00000184847 69 ntBASIC21.08■□□□□ 0.97
Scnn1aQ61180 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Scnn1aQ61180 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Scnn1aQ61180 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Scnn1aQ61180 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Scnn1aQ61180 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Scnn1aQ61180 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Scnn1aQ61180 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Scnn1aQ61180 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC21.07■□□□□ 0.96
Scnn1aQ61180 AL672049.1-201ENSMUST00000197943 91 ntBASIC21.07■□□□□ 0.96
Scnn1aQ61180 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
Scnn1aQ61180 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC21.07■□□□□ 0.96
Scnn1aQ61180 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Scnn1aQ61180 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms