Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Ptch1Q61115 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Ptch1Q61115 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Ptch1Q61115 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Ptch1Q61115 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.86
Ptch1Q61115 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC26.7■■□□□ 1.86
Ptch1Q61115 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Ptch1Q61115 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Ptch1Q61115 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Ptch1Q61115 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Ptch1Q61115 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Ptch1Q61115 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Ptch1Q61115 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
Ptch1Q61115 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Ptch1Q61115 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC26.68■■□□□ 1.86
Ptch1Q61115 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Ptch1Q61115 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Ptch1Q61115 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
Ptch1Q61115 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Ptch1Q61115 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC26.68■■□□□ 1.86
Ptch1Q61115 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ptch1Q61115 Gm8258-201ENSMUST00000055593 1449 ntBASIC26.67■■□□□ 1.86
Ptch1Q61115 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ptch1Q61115 AC133598.3-202ENSMUST00000224219 531 ntBASIC26.67■■□□□ 1.86
Ptch1Q61115 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ptch1Q61115 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ptch1Q61115 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ptch1Q61115 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ptch1Q61115 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
Ptch1Q61115 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC26.66■■□□□ 1.86
Ptch1Q61115 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ptch1Q61115 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
Ptch1Q61115 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ptch1Q61115 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ptch1Q61115 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ptch1Q61115 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
Ptch1Q61115 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Ptch1Q61115 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC26.65■■□□□ 1.86
Ptch1Q61115 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Ptch1Q61115 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
Ptch1Q61115 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Ptch1Q61115 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Ptch1Q61115 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Ptch1Q61115 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Ptch1Q61115 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Ptch1Q61115 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Ptch1Q61115 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Ptch1Q61115 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC26.64■■□□□ 1.86
Ptch1Q61115 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Ptch1Q61115 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
Ptch1Q61115 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.85
Ptch1Q61115 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC26.64■■□□□ 1.85
Ptch1Q61115 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC26.64■■□□□ 1.85
Ptch1Q61115 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Ptch1Q61115 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
Ptch1Q61115 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Ptch1Q61115 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC26.63■■□□□ 1.85
Ptch1Q61115 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
Ptch1Q61115 Gm37805-201ENSMUST00000192612 1094 ntBASIC26.63■■□□□ 1.85
Ptch1Q61115 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
Ptch1Q61115 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Ptch1Q61115 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Ptch1Q61115 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
Ptch1Q61115 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
Ptch1Q61115 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Ptch1Q61115 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
Ptch1Q61115 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
Ptch1Q61115 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC26.62■■□□□ 1.85
Ptch1Q61115 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC26.62■■□□□ 1.85
Ptch1Q61115 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Ptch1Q61115 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC26.62■■□□□ 1.85
Ptch1Q61115 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Ptch1Q61115 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Ptch1Q61115 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Ptch1Q61115 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Ptch1Q61115 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
Ptch1Q61115 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
Ptch1Q61115 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC26.61■■□□□ 1.85
Ptch1Q61115 Gm25016-201ENSMUST00000158399 131 ntBASIC26.61■■□□□ 1.85
Ptch1Q61115 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC26.61■■□□□ 1.85
Ptch1Q61115 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Ptch1Q61115 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
Ptch1Q61115 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
Ptch1Q61115 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Ptch1Q61115 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Ptch1Q61115 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Ptch1Q61115 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Ptch1Q61115 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Ptch1Q61115 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC26.6■■□□□ 1.85
Ptch1Q61115 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC26.6■■□□□ 1.85
Ptch1Q61115 Gm27704-201ENSMUST00000185094 107 ntBASIC26.6■■□□□ 1.85
Ptch1Q61115 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC26.6■■□□□ 1.85
Ptch1Q61115 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Ptch1Q61115 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC26.6■■□□□ 1.85
Ptch1Q61115 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Ptch1Q61115 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Ptch1Q61115 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
Ptch1Q61115 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
Ptch1Q61115 Umpk-ps-201ENSMUST00000211897 827 ntBASIC26.59■■□□□ 1.85
Ptch1Q61115 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms