Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Mir5130-201ENSMUST00000175160 84 ntBASIC18.27■□□□□ 0.52
Col12a1Q60847 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col12a1Q60847 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Col12a1Q60847 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Col12a1Q60847 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Col12a1Q60847 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col12a1Q60847 Gm6443-201ENSMUST00000203599 874 ntBASIC18.27■□□□□ 0.52
Col12a1Q60847 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col12a1Q60847 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col12a1Q60847 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Col12a1Q60847 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.27■□□□□ 0.51
Col12a1Q60847 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Col12a1Q60847 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.27■□□□□ 0.51
Col12a1Q60847 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Col12a1Q60847 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.27■□□□□ 0.51
Col12a1Q60847 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Col12a1Q60847 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.26■□□□□ 0.51
Col12a1Q60847 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col12a1Q60847 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Col12a1Q60847 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col12a1Q60847 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Col12a1Q60847 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.26■□□□□ 0.51
Col12a1Q60847 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col12a1Q60847 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col12a1Q60847 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.25■□□□□ 0.51
Col12a1Q60847 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col12a1Q60847 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Col12a1Q60847 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col12a1Q60847 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col12a1Q60847 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col12a1Q60847 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col12a1Q60847 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.25■□□□□ 0.51
Col12a1Q60847 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col12a1Q60847 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.25■□□□□ 0.51
Col12a1Q60847 Gm18669-201ENSMUST00000216049 778 ntBASIC18.25■□□□□ 0.51
Col12a1Q60847 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.25■□□□□ 0.51
Col12a1Q60847 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Col12a1Q60847 Gm12085-201ENSMUST00000119263 940 ntBASIC18.25■□□□□ 0.51
Col12a1Q60847 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Col12a1Q60847 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col12a1Q60847 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col12a1Q60847 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Col12a1Q60847 Gm25016-201ENSMUST00000158399 131 ntBASIC18.24■□□□□ 0.51
Col12a1Q60847 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.24■□□□□ 0.51
Col12a1Q60847 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.24■□□□□ 0.51
Col12a1Q60847 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
Col12a1Q60847 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col12a1Q60847 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Col12a1Q60847 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.24■□□□□ 0.51
Col12a1Q60847 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Col12a1Q60847 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Col12a1Q60847 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.23■□□□□ 0.51
Col12a1Q60847 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.23■□□□□ 0.51
Col12a1Q60847 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col12a1Q60847 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col12a1Q60847 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col12a1Q60847 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col12a1Q60847 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col12a1Q60847 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.23■□□□□ 0.51
Col12a1Q60847 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col12a1Q60847 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col12a1Q60847 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col12a1Q60847 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.23■□□□□ 0.51
Col12a1Q60847 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Col12a1Q60847 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Col12a1Q60847 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.23■□□□□ 0.51
Col12a1Q60847 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Col12a1Q60847 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col12a1Q60847 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC18.22■□□□□ 0.51
Col12a1Q60847 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Col12a1Q60847 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Col12a1Q60847 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col12a1Q60847 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col12a1Q60847 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col12a1Q60847 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Col12a1Q60847 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col12a1Q60847 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.22■□□□□ 0.51
Col12a1Q60847 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.22■□□□□ 0.51
Col12a1Q60847 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col12a1Q60847 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Col12a1Q60847 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Col12a1Q60847 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Col12a1Q60847 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Col12a1Q60847 Gm5587-201ENSMUST00000206270 674 ntBASIC18.21■□□□□ 0.51
Col12a1Q60847 Gm18115-201ENSMUST00000221209 621 ntBASIC18.21■□□□□ 0.51
Col12a1Q60847 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Col12a1Q60847 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Col12a1Q60847 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col12a1Q60847 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col12a1Q60847 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col12a1Q60847 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC18.21■□□□□ 0.51
Col12a1Q60847 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Col12a1Q60847 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col12a1Q60847 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.21■□□□□ 0.51
Col12a1Q60847 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
Col12a1Q60847 Gm29518-201ENSMUST00000190858 372 ntBASIC18.21■□□□□ 0.5
Col12a1Q60847 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.21■□□□□ 0.5
Col12a1Q60847 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Col12a1Q60847 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Col12a1Q60847 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms