Protein–RNA interactions for Protein: Q5SWD9

Tsr1, Pre-rRNA-processing protein TSR1 homolog, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsr1Q5SWD9 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.65■□□□□ 0.74
Tsr1Q5SWD9 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.65■□□□□ 0.74
Tsr1Q5SWD9 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tsr1Q5SWD9 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tsr1Q5SWD9 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tsr1Q5SWD9 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tsr1Q5SWD9 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tsr1Q5SWD9 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tsr1Q5SWD9 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tsr1Q5SWD9 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tsr1Q5SWD9 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Tsr1Q5SWD9 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Tsr1Q5SWD9 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Tsr1Q5SWD9 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.64■□□□□ 0.73
Tsr1Q5SWD9 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Tsr1Q5SWD9 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Tsr1Q5SWD9 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tsr1Q5SWD9 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tsr1Q5SWD9 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
Tsr1Q5SWD9 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tsr1Q5SWD9 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tsr1Q5SWD9 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tsr1Q5SWD9 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tsr1Q5SWD9 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.64■□□□□ 0.73
Tsr1Q5SWD9 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tsr1Q5SWD9 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tsr1Q5SWD9 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tsr1Q5SWD9 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tsr1Q5SWD9 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tsr1Q5SWD9 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tsr1Q5SWD9 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tsr1Q5SWD9 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tsr1Q5SWD9 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tsr1Q5SWD9 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Tsr1Q5SWD9 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.62■□□□□ 0.73
Tsr1Q5SWD9 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tsr1Q5SWD9 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tsr1Q5SWD9 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Tsr1Q5SWD9 Gm43060-201ENSMUST00000200621 289 ntBASIC19.62■□□□□ 0.73
Tsr1Q5SWD9 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tsr1Q5SWD9 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tsr1Q5SWD9 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tsr1Q5SWD9 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.62■□□□□ 0.73
Tsr1Q5SWD9 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tsr1Q5SWD9 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tsr1Q5SWD9 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
Tsr1Q5SWD9 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tsr1Q5SWD9 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Tsr1Q5SWD9 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
Tsr1Q5SWD9 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tsr1Q5SWD9 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Tsr1Q5SWD9 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Tsr1Q5SWD9 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.61■□□□□ 0.73
Tsr1Q5SWD9 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Tsr1Q5SWD9 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Tsr1Q5SWD9 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.61■□□□□ 0.73
Tsr1Q5SWD9 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tsr1Q5SWD9 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tsr1Q5SWD9 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.61■□□□□ 0.73
Tsr1Q5SWD9 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Tsr1Q5SWD9 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Tsr1Q5SWD9 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.61■□□□□ 0.73
Tsr1Q5SWD9 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tsr1Q5SWD9 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Tsr1Q5SWD9 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Tsr1Q5SWD9 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tsr1Q5SWD9 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tsr1Q5SWD9 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tsr1Q5SWD9 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.6■□□□□ 0.73
Tsr1Q5SWD9 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tsr1Q5SWD9 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tsr1Q5SWD9 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tsr1Q5SWD9 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Tsr1Q5SWD9 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tsr1Q5SWD9 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tsr1Q5SWD9 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tsr1Q5SWD9 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tsr1Q5SWD9 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tsr1Q5SWD9 Gm11421-201ENSMUST00000122124 294 ntBASIC19.59■□□□□ 0.73
Tsr1Q5SWD9 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Tsr1Q5SWD9 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tsr1Q5SWD9 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tsr1Q5SWD9 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Tsr1Q5SWD9 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Tsr1Q5SWD9 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
Tsr1Q5SWD9 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tsr1Q5SWD9 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Tsr1Q5SWD9 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.58■□□□□ 0.73
Tsr1Q5SWD9 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Tsr1Q5SWD9 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Tsr1Q5SWD9 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
Tsr1Q5SWD9 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tsr1Q5SWD9 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tsr1Q5SWD9 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Tsr1Q5SWD9 Gm40848-201ENSMUST00000221998 324 ntBASIC19.58■□□□□ 0.72
Tsr1Q5SWD9 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Tsr1Q5SWD9 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tsr1Q5SWD9 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tsr1Q5SWD9 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tsr1Q5SWD9 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms